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ACD41_109

Alias: ACD41_206719.5169.7

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD41_109_1

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229..1398
DNA (1170bp) protein (390aa)
1A family penicillin-binding protein
penicillin-binding protein, 1A family n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI000174322B (db=UNIREF evalue=4.0e-25 bit_score=119.0 identity=42.24 coverage=40.5128205128205)
seg (db=Seg db_id=seg from=322 to=338)
seg (db=Seg db_id=seg from=358 to=387)
ACD41_109_2

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comp(1395..1688)
DNA (294bp) protein (98aa)
DUF721 (db=HMMPfam db_id=PF05258 from=8 to=94 evalue=1.1e-09 interpro_id=IPR007922 interpro_description=Protein of unknown function DUF721)
Uncharacterized protein {ECO:0000313|EMBL:EKD79283.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_109_3

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comp(1700..2155)
DNA (456bp) protein (152aa)
DNA polymerase III beta subunit
DNA clamp (db=superfamily db_id=SSF55979 from=28 to=151 evalue=3.8e-25)
DNA_pol3_beta_3 (db=HMMPfam db_id=PF02768 from=29 to=150 evalue=1.3e-21 interpro_id=IPR022635 interpro_description=DNA polymerase III, beta chain, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
no description (db=Gene3D db_id=G3DSA:3.10.150.10 from=31 to=151 evalue=7.3e-21 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
ACD41_109_4

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comp(3078..4493)
DNA (1416bp) protein (472aa)
dnaA; chromosome replication initiator DnaA
dnaA; chromosome replication initiator DnaA
Chromosomal replication initiator protein dnaA n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=DNAA_HERA2 (db=UNIREF evalue=3.0e-113 bit_score=412.0 identity=44.63 coverage=98.728813559322)
seg (db=Seg db_id=seg from=122 to=134)
ACD41_109_5

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4569..4706
DNA (138bp) protein (46aa)
RIBOSOMAL_L34 (db=PatternScan db_id=PS00784 from=3 to=22 evalue=0.0 interpro_id=IPR020939 interpro_description=Ribosomal protein L34, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L34 (db=HMMPfam db_id=PF00468 from=2 to=43 evalue=8.0e-18 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpmH_bact: ribosomal protein L34 (db=HMMTigr db_id=TIGR01030 from=2 to=45 evalue=1.1e-11 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Q4NZT1_9DELT_Q4NZT1; (db=BlastProDom db_id=PD003101 from=3 to=43 evalue=6.0e-08 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD41_109_6

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4706..4993
DNA (288bp) protein (96aa)
seg (db=Seg db_id=seg from=37 to=48)
RIBONUCLEASE_P (db=PatternScan db_id=PS00648 from=44 to=58 evalue=0.0 interpro_id=IPR020539 interpro_description=Ribonuclease P, conserved site)
Ribonuclease_P (db=HMMPfam db_id=PF00825 from=2 to=93 evalue=3.2e-22 interpro_id=IPR000100 interpro_description=Ribonuclease P GO=Molecular Function: tRNA binding (GO:0000049), Molecular Function: ribonuclease P activity (GO:0004526), Biological Process: tRNA processing (GO:0008033))
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=2 to=94 evalue=3.0e-18 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold)
ACD41_109_7

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4990..5202
DNA (213bp) protein (71aa)
hypothetical protein
DUF37 (db=HMMPfam db_id=PF01809 from=7 to=71 evalue=1.2e-19 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
Q3AG59_CARHY_Q3AG59; (db=BlastProDom db_id=PD004225 from=35 to=71 evalue=2.0e-10 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
Uncharacterized protein {ECO:0000313|EMBL:EKD79281.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 7 items

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