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ACD41_111

Alias: ACD41_3770.2649.19

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD41_111_1

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1..195
DNA (195bp) protein (65aa)
seg (db=Seg db_id=seg from=40 to=46)
seg (db=Seg db_id=seg from=16 to=32)
RIBONUCLEASE_P (db=PatternScan db_id=PS00648 from=10 to=24 evalue=0.0 interpro_id=IPR020539 interpro_description=Ribonuclease P, conserved site)
Ribonuclease_P (db=HMMPfam db_id=PF00825 from=3 to=64 evalue=7.1e-15 interpro_id=IPR000100 interpro_description=Ribonuclease P GO=Molecular Function: tRNA binding (GO:0000049), Molecular Function: ribonuclease P activity (GO:0004526), Biological Process: tRNA processing (GO:0008033))
ACD41_111_2

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192..440
DNA (249bp) protein (83aa)
hypothetical protein
DUF37 (db=HMMPfam db_id=PF01809 from=6 to=79 evalue=7.0e-23 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
Q3AG59_CARHY_Q3AG59; (db=BlastProDom db_id=PD004225 from=35 to=79 evalue=1.0e-14 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
TIGR00278: conserved hypothetical protein Y (db=HMMTigr db_id=TIGR00278 from=9 to=81 evalue=1.3e-14 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
ACD41_111_3

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437..1237
DNA (801bp) protein (267aa)
preprotein translocase subunit YidC
Inner membrane protein, 60 kDa n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RNG0_CAMFF (db=UNIREF evalue=2.0e-19 bit_score=99.4 identity=29.84 coverage=80.8988764044944)
seg (db=Seg db_id=seg from=168 to=178)
seg (db=Seg db_id=seg from=100 to=110)
ACD41_111_4

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1224..1496
DNA (273bp) protein (91aa)
PRC (db=HMMPfam db_id=PF05239 from=5 to=42 evalue=8.4e-05 interpro_id=IPR007903 interpro_description=PRC-barrel)
Uncharacterized protein {ECO:0000313|EMBL:EKD78870.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_111_5

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comp(1463..1930)
DNA (468bp) protein (156aa)
hypothetical protein
seg (db=Seg db_id=seg from=28 to=40)
UPF0079 (db=HMMPfam db_id=PF02367 from=14 to=130 evalue=9.3e-32 interpro_id=IPR003442 interpro_description=Uncharacterised protein family UPF0079, ATPase bacteria)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=141 evalue=7.9e-29)
ACD41_111_6

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1950..2687
DNA (738bp) protein (246aa)
twitching motility protein
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=4 to=238 evalue=2.2e-60)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=106 to=246 evalue=8.2e-45)
GSPII_E (db=HMMPfam db_id=PF00437 from=124 to=246 evalue=3.3e-35 interpro_id=IPR001482 interpro_description=Type II secretion system protein E GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: transport (GO:0006810))
Displaying 6 items

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