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ACD41_127

Alias: ACD41_1879.14407.23

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD41_127_1

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comp(3..1403)
DNA (1401bp) protein (467aa)
seg (db=Seg db_id=seg from=165 to=178)
Uncharacterized protein {ECO:0000313|EMBL:EKD79324.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_127_2

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comp(1542..2330)
DNA (789bp) protein (263aa)
1542..2330 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD79325.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_127_3

Not on your lists

comp(2273..3202)
DNA (930bp) protein (310aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=286 to=308)
Uncharacterized protein {ECO:0000313|EMBL:EKD79326.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD41_127_4

Not on your lists

comp(3212..3988)
DNA (777bp) protein (259aa)
iclR helix-turn-helix domain protein
Transcriptional regulator, TrmB n=1 Tax=Burkholderia sp. Ch1-1 RepID=D5NS62_9BURK (db=UNIREF evalue=9.0e-16 bit_score=87.4 identity=28.34 coverage=89.5752895752896)
TrmB (db=HMMPfam db_id=PF01978 from=12 to=64 evalue=2.5e-07 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EKD79327.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_127_5

Not on your lists

comp(4100..5770)
DNA (1671bp) protein (557aa)
seg (db=Seg db_id=seg from=492 to=507)
Uncharacterized protein {ECO:0000313|EMBL:EKD79328.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_127_6

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comp(5772..7271)
DNA (1500bp) protein (500aa)
Multiheme cytochromes (db=superfamily db_id=SSF48695 from=27 to=186 evalue=9.6e-05)
Multiheme cytochromes (db=superfamily db_id=SSF48695 from=307 to=497 evalue=0.019)
Uncharacterized protein {ECO:0000313|EMBL:EKD79329.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
May only contain one standard CxxCH domain Jill Banfield (11/15/12)
ACD41_127_7

Not on your lists

comp(7401..7823)
DNA (423bp) protein (141aa)
hypothetical protein
seg (db=Seg db_id=seg from=107 to=118)
DUF559 (db=HMMPfam db_id=PF04480 from=16 to=120 evalue=2.9e-38 interpro_id=IPR007569 interpro_description=Protein of unknown function DUF559)
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=9 to=124 evalue=1.2e-19 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
ACD41_127_8

Not on your lists

comp(7902..9497)
DNA (1596bp) protein (532aa)
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=499 to=529 evalue=0.0002)
Uncharacterized protein {ECO:0000313|EMBL:EKD79331.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_127_9

Not on your lists

comp(9499..11076)
DNA (1578bp) protein (526aa)
seg (db=Seg db_id=seg from=116 to=128)
Uncharacterized protein {ECO:0000313|EMBL:EKD79332.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_127_10

Not on your lists

comp(11078..12673)
DNA (1596bp) protein (532aa)
hypothetical protein (db=KEGG evalue=1.0e-07 bit_score=61.6 identity=36.17 coverage=15.2255639097744)
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=500 to=528 evalue=0.00098)
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=54 to=103 evalue=0.0057)
Uncharacterized protein {ECO:0000313|EMBL:EKD79333.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_127_11

Not on your lists

comp(12675..14264)
DNA (1590bp) protein (530aa)
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=53 to=102 evalue=0.0018)
Uncharacterized protein {ECO:0000313|EMBL:EKD79334.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_127_12

Not on your lists

14308..14445
DNA (138bp) protein (46aa)
seg (db=Seg db_id=seg from=2 to=45)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKD79335.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 12 items

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