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ACD41_185

Alias: ACD41_20159.3471.14

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD41_185_1

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1..792
DNA (792bp) protein (264aa)
seg (db=Seg db_id=seg from=185 to=199)
seg (db=Seg db_id=seg from=28 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=214 to=236)
transmembrane_regions (db=TMHMM db_id=tmhmm from=185 to=207)
ACD41_185_2

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858..1019
DNA (162bp) protein (54aa)
Ribosomal_L33 (db=HMMPfam db_id=PF00471 from=7 to=53 evalue=4.7e-15 interpro_id=IPR001705 interpro_description=Ribosomal protein L33 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Zn-binding ribosomal proteins (db=superfamily db_id=SSF57829 from=3 to=53 evalue=2.2e-11 interpro_id=IPR011332 interpro_description=Ribosomal protein, zinc-binding domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpmG_bact: ribosomal protein L33 (db=HMMTigr db_id=TIGR01023 from=1 to=53 evalue=3.7e-08 interpro_id=IPR001705 interpro_description=Ribosomal protein L33 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L33 (db=HAMAP db_id=MF_00294 from=2 to=53 evalue=14.39 interpro_id=IPR001705 interpro_description=Ribosomal protein L33 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD41_185_3

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comp(1096..1605)
DNA (510bp) protein (170aa)
seg (db=Seg db_id=seg from=101 to=129)
transmembrane_regions (db=TMHMM db_id=tmhmm from=118 to=140)
transmembrane_regions (db=TMHMM db_id=tmhmm from=89 to=111)
transmembrane_regions (db=TMHMM db_id=tmhmm from=67 to=84)
ACD41_185_4

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comp(1592..2107)
DNA (516bp) protein (172aa)
2'-5' RNA ligase
LigT-like (db=superfamily db_id=SSF55144 from=2 to=171 evalue=2.0e-25 interpro_id=IPR009097 interpro_description=RNA ligase/cyclic nucleotide phosphodiesterase GO=Molecular Function: catalytic activity (GO:0003824), Cellular Component: intracellular (GO:0005622), Biological Process: RNA metabolic process (GO:0016070))
no description (db=Gene3D db_id=G3DSA:3.90.1140.10 from=2 to=171 evalue=1.0e-16)
2_5_ligase: 2'-5' RNA ligase (db=HMMTigr db_id=TIGR02258 from=2 to=171 evalue=4.9e-11 interpro_id=IPR004175 interpro_description=2',5' RNA ligase GO=Molecular Function: 2'-5'-RNA ligase activity (GO:0008664), Biological Process: RNA metabolic process (GO:0016070))
ACD41_185_5

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2204..3508
DNA (1305bp) protein (435aa)
integrin alpha repeat/hemolysin-type calcium-binding repeat family protein
Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VG07_9RHOB (db=UNIREF evalue=2.0e-37 bit_score=160.0 identity=35.16 coverage=93.3333333333333)
seg (db=Seg db_id=seg from=6 to=13)
seg (db=Seg db_id=seg from=82 to=94)
Displaying 5 items

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