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PLM4_65_coex_sep16_scaffold_69

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_69_1
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(3..551)
DNA (549bp) protein (183aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein Tax=Bradyrhizobium sp. WSM471 RepID=H5YMM9_9BRAD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
PLM4_65_coex_sep16_scaffold_69_2
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(551..1729)
DNA (1179bp) protein (393aa)
Filamentous hemagglutinin family outer membrane protein Tax=Microcoleus vaginatus FGP-2 RepID=F5UG68_9CYAN
filamentous hemagglutinin family outer membrane protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
PLM4_65_coex_sep16_scaffold_69_3
R_OD1_Yanofskybacteria_41_29, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(1762..2412)
DNA (651bp) protein (217aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037B45D7
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_29_curated
PLM4_65_coex_sep16_scaffold_69_4
R_OD1_Yanofskybacteria_39_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(2513..3361)
DNA (849bp) protein (283aa)
ATP-NAD/AcoX kinase; K00858 NAD+ kinase [EC:2.7.1.23] bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
ATP-NAD/AcoX kinase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_39_10_curated
PLM4_65_coex_sep16_scaffold_69_5
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

3452..4483
DNA (1032bp) protein (344aa)
tRNA-specific 2-thiouridylase MnmA bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
PLM4_65_coex_sep16_scaffold_69_6
R_OD1_Yanofskybacteria_44_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(4515..6062)
DNA (1548bp) protein (516aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_22_curated
PLM4_65_coex_sep16_scaffold_69_7
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

6347..7879
DNA (1533bp) protein (511aa)
metal dependent phosphohydrolase (EC:3.1.4.16)
Ribonuclease Y bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
PLM4_65_coex_sep16_scaffold_69_8
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

8116..8415
DNA (300bp) protein (100aa)
Histone family protein DNA-binding protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Bacterial nucleoid DNA-binding protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
PLM4_65_coex_sep16_scaffold_69_9
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8891..9457)
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z3F0_DESAF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGJ51490.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
PLM4_65_coex_sep16_scaffold_69_10
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

9483..10310
DNA (828bp) protein (276aa)
CapA Tax=Bacillus cereus group RepID=B3U0E9_BACTU bin=ACD48 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
PLM4_65_coex_sep16_scaffold_69_11
R_OD1_Yanofskybacteria_41_21, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

10334..11974
DNA (1641bp) protein (547aa)
Putative uncharacterized protein Tax=Clostridium sp. 7_2_43FAA RepID=C1I243_9CLOT bin=ACD15 species=Clostridium sp. 7_2_43FAA genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_41_21_curated
PLM4_65_coex_sep16_scaffold_69_trna_10
unknown

Not on your lists

comp(12334..12404)
DNA (71bp)
transferRNA Gly
PLM4_65_coex_sep16_scaffold_69_trna_9
unknown

Not on your lists

comp(12428..12498)
DNA (71bp)
transferRNA Pro
PLM4_65_coex_sep16_scaffold_69_trna_8
unknown

Not on your lists

comp(12552..12623)
DNA (72bp)
transferRNA Arg
PLM4_65_coex_sep16_scaffold_69_12
unknown

Not on your lists

12775..13116
DNA (342bp) protein (114aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_69_13
GWA1_OP11_45_10_partial, Microgenomates, Bacteria

Not on your lists

13233..14111
DNA (879bp) protein (293aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT87181.1}; species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA1_45_10.;"
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
PLM4_65_coex_sep16_scaffold_69_trna_7
unknown

Not on your lists

comp(14161..14232)
DNA (72bp)
transferRNA His
PLM4_65_coex_sep16_scaffold_69_14
R_SM2F11_43_23, SM2F11, Bacteria

Not on your lists


14917..16638
DNA (1722bp) protein (574aa)
Alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_43_23_curated
PLM4_65_coex_sep16_scaffold_69_15
R_OD1_Nomurabacteria_36_29, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16643..17041
DNA (399bp) protein (133aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_36_29_curated
PLM4_65_coex_sep16_scaffold_69_16
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

17053..18057
DNA (1005bp) protein (335aa)
hypothetical protein bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
PLM4_65_coex_sep16_scaffold_69_17
unknown

Not on your lists

comp(18128..18586)
DNA (459bp) protein (153aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_69_18
GWA1_OD1_39_13_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

18864..21782
DNA (2919bp) protein (973aa)
UvrD/REP helicase {ECO:0000313|EMBL:KKR02328.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_39_13.;"
UvrD/REP helicase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
UvrD/REP helicase
PLM4_65_coex_sep16_scaffold_69_19
GWF2_OD1_43_596, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

22165..24213
DNA (2049bp) protein (683aa)
Probable DNA-directed RNA polymerase subunit delta bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Putative DNA-directed RNA polymerase subunit delta {ECO:0000313|EMBL:KKT15831.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWF2_43_596.;"
PLM4_65_coex_sep16_scaffold_69_20
R_OD1_Yanofskybacteria_44_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


24928..25314
DNA (387bp) protein (129aa)
30S ribosomal protein S13 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S13
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_22_curated
PLM4_65_coex_sep16_scaffold_69_21
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


25320..25757
DNA (438bp) protein (146aa)
Ribosomal protein S11 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
rpsK; 30S ribosomal protein S11
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
PLM4_65_coex_sep16_scaffold_69_22
R_OD1_Yanofskybacteria_38_22b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


25787..26422
DNA (636bp) protein (212aa)
30S ribosomal protein S4 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S4
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_38_22b_curated
PLM4_65_coex_sep16_scaffold_69_23
R_OD1_Yanofskybacteria_49_17, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

26581..27345
DNA (765bp) protein (255aa)
DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_49_17_curated
PLM4_65_coex_sep16_scaffold_69_24
R_OD1_Yanofskybacteria_41_34, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


27350..27697
DNA (348bp) protein (116aa)
50S ribosomal protein L17 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
rplQ; 50S ribosomal protein L17
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_41_34_curated
PLM4_65_coex_sep16_scaffold_69_25
R_OD1_Yanofskybacteria_44_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


27703..28044
DNA (342bp) protein (114aa)
50S ribosomal protein L13 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
LSU ribosomal protein L13P
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_22_curated
PLM4_65_coex_sep16_scaffold_69_26
GWD2_OD1_39_48_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


28046..28642
DNA (597bp) protein (199aa)
30S ribosomal protein S9 {ECO:0000313|EMBL:KKR23565.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWD2_39_48.;"
30S ribosomal protein S9 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S9
Displaying items 1-30 of 102 in total

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