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PLM4_65_coex_sep16_scaffold_1893

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1893_1
unknown

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1..312
DNA (312bp) protein (104aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1893_2
R_OD1_Wolfebacteria_44_18, Wolfebacteria, Parcubacteria, Bacteria

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297..2279
DNA (1983bp) protein (661aa)
id=4731923 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_44_18_curated
PLM4_65_coex_sep16_scaffold_1893_3
unknown

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2279..3220
DNA (942bp) protein (314aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1893_4
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

3192..3707
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW47109.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
id=4731921 bin=GWC2_OD1_43_27 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
PLM4_65_coex_sep16_scaffold_1893_5
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

3988..4665
DNA (678bp) protein (226aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XV01_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS18362.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_1893_6
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

4760..6394
DNA (1635bp) protein (545aa)
Type IV secretory pathway VirB4 components-like protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Type IV secretory pathway VirB4 components-like protein
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
PLM4_65_coex_sep16_scaffold_1893_7
unknown

Not on your lists

6407..7306
DNA (900bp) protein (300aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1893_8
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

7303..7983
DNA (681bp) protein (227aa)
transmembrane_regions 7..29 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
PLM4_65_coex_sep16_scaffold_1893_9
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

7980..9086
DNA (1107bp) protein (369aa)
Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
PLM4_65_coex_sep16_scaffold_1893_10
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

comp(9073..9510)
DNA (438bp) protein (146aa)
single-stranded nucleic acid binding R3H domain-containing protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
single-stranded nucleic acid binding R3H domain-containing protein
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
PLM4_65_coex_sep16_scaffold_1893_11
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(9473..10186)
DNA (714bp) protein (238aa)
membrane protein insertase, YidC/Oxa1 family; K03217 preprotein translocase subunit YidC bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
inner membrane protein oxaA
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
PLM4_65_coex_sep16_scaffold_1893_12
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

10768..12123
DNA (1356bp) protein (452aa)
Chromosomal replication initiator protein DnaA {ECO:0000313|EMBL:KKW48062.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
chromosomal replication initiator protein DnaA bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
dnaA; chromosomal replication initiator protein DnaA
PLM4_65_coex_sep16_scaffold_1893_13
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

12230..13330
DNA (1101bp) protein (367aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta Tax=uncultured bacterium RepID=K1XGV7_9BACT
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
PLM4_65_coex_sep16_scaffold_1893_14
R_OD1_57_28, Parcubacteria, Bacteria

Not on your lists

comp(13327..14778)
DNA (1452bp) protein (484aa)
1A family penicillin-binding protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
glycosyl transferase family protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
PLM4_65_coex_sep16_scaffold_1893_15
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

comp(14787..15488)
DNA (702bp) protein (234aa)
1A family penicillin-binding protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
1A family penicillin-binding protein
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
PLM4_65_coex_sep16_scaffold_1893_16
unknown

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comp(15513..15707)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1893_17
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(15796..16266)
DNA (471bp) protein (157aa)
Crossover junction endodeoxyribonuclease RuvC bin=GWC2_Chloroflexi_73_18 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Holliday junction resolvase
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
PLM4_65_coex_sep16_scaffold_1893_18
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(16263..16790)
DNA (528bp) protein (176aa)
hypothetical protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
PLM4_65_coex_sep16_scaffold_1893_19
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

16893..17363
DNA (471bp) protein (157aa)
UniRef90_C3U0N5 Putative type II secretion system protein E Tax=uncultured bacterium RepID=C3U0N5_9BACT bin=ACD81 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
PLM4_65_coex_sep16_scaffold_1893_20
R_OD1_57_28, Parcubacteria, Bacteria

Not on your lists

17476..18495
DNA (1020bp) protein (340aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1X1P5_9BACT
bacterial type II secretion system protein E
Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
PLM4_65_coex_sep16_scaffold_1893_21
unknown

Not on your lists

18595..18870
DNA (276bp) protein (92aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1893_22
R_OD1_57_28, Parcubacteria, Bacteria

Not on your lists

19068..19757
DNA (690bp) protein (230aa)
ruvB; Holliday junction DNA helicase ruvB bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ruvB; Holliday junction DNA helicase RuvB
Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
PLM4_65_coex_sep16_scaffold_1893_23
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

20039..20596
DNA (558bp) protein (186aa)
alpha amylase bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
PLM4_65_coex_sep16_scaffold_1893_24
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

20535..20786
DNA (252bp) protein (84aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003737F3B
ATPase
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
Displaying 24 items

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