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PLM4_65_coex_sep16_scaffold_8132

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_8132_1
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

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2..835
DNA (834bp) protein (278aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1X2M2_9BACT
multi-sensor signal transduction histidine kinase
Tax=GWB1_OD1_49_6_curated
PLM4_65_coex_sep16_scaffold_8132_2
R_OD1_52_25, Parcubacteria, Bacteria

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1908..2483
DNA (576bp) protein (192aa)
Holliday junction ATP-dependent DNA helicase RuvA bin=GWC1_OD1_38_17 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Holliday junction DNA helicase RuvA
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
PLM4_65_coex_sep16_scaffold_8132_3
R_OD1_57_28, Parcubacteria, Bacteria

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2714..3313
DNA (600bp) protein (200aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase bin=GWA1_ZB2_49_26 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
UDP-N-acetylmuramyl tripeptide synthetase
Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
PLM4_65_coex_sep16_scaffold_8132_4
CG_CPR01_01, CG_CPR01, Bacteria

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3427..3858
DNA (432bp) protein (144aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
Tax=CG_CPR01_01
PLM4_65_coex_sep16_scaffold_8132_5
unknown

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comp(3881..4297)
DNA (417bp) protein (139aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_8132_6

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4407..5753
DNA (1347bp) protein (449aa)
Beta-Casp domain-containing protein {ECO:0000313|EMBL:KKW16867.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_50_14.;"
amt:Amet_0777 RNA-metabolising metallo-beta-lactamase; K07576 metallo-beta-lactamase family protein bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RNA-metabolising metallo-beta-lactamase
PLM4_65_coex_sep16_scaffold_8132_7
R_OD1_53_13, Parcubacteria, Bacteria

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5760..6392
DNA (633bp) protein (211aa)
Putative uncharacterized protein bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
PLM4_65_coex_sep16_scaffold_8132_8
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

6389..7471
DNA (1083bp) protein (361aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
PLM4_65_coex_sep16_scaffold_8132_trna_1
unknown

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7477..7548
DNA (72bp)
transferRNA Arg
PLM4_65_coex_sep16_scaffold_8132_9
RLO_OD1_Falkowbacteria_42_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

7734..8282
DNA (549bp) protein (183aa)
seg 187..199 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_42_13_curated
PLM4_65_coex_sep16_scaffold_8132_10
R_OD1_Falkowbacteria_40_23, Falkowbacteria, Parcubacteria, Bacteria

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9096..9950
DNA (855bp) protein (285aa)
RNA-directed DNA polymerase bin=GWF2_Firmicute_51_9 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWF2_Firmicute_51_9 organism_group=Firmicute
RNA-directed DNA polymerase
Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_40_23_curated
PLM4_65_coex_sep16_scaffold_8132_11
R_OD1_Yanofskybacteria_41_34, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

9958..10518
DNA (561bp) protein (187aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036739CA
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_41_34_curated
Displaying 12 items

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