Alias: ACD43_99279.3957.8
name | lists | location/seqs | annotations | notes |
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ACD43_42_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(3..191)
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SSU ribosomal protein S8p (S15Ae) n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NUZ6_9GAMM (db=UNIREF evalue=1.0e-12 bit_score=75.5 identity=55.56 coverage=98.4126984126984)
SSU ribosomal protein S8p (S15Ae)
Ribosomal protein S8 (db=superfamily db_id=SSF56047 from=2 to=63 evalue=4.0e-13 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:3.30.1370.30 from=1 to=63 evalue=4.7e-13)
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ACD43_42_2
uncultured bacterium, Bacteria
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Not on your lists |
comp(218..403)
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Ribosomal protein S14
RIBOSOMAL_S14 (db=PatternScan db_id=PS00527 from=23 to=45 evalue=0.0 interpro_id=IPR018271 interpro_description=Ribosomal protein S14, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S14 (db=HMMPanther db_id=PTHR19836 from=10 to=61 evalue=2.2e-25 interpro_id=IPR001209 interpro_description=Ribosomal protein S14 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S14 (db=HMMPanther db_id=PTHR19836:SF6 from=10 to=61 evalue=2.2e-25)
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ACD43_42_3
uncultured bacterium, Bacteria
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Not on your lists |
comp(408..950)
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50S ribosomal protein L5
RIBOSOMAL_L5 (db=PatternScan db_id=PS00358 from=58 to=74 evalue=0.0 interpro_id=IPR020929 interpro_description=Ribosomal protein L5, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
60S RIBOSOMAL PROTEIN L11-RELATED (db=HMMPanther db_id=PTHR11994 from=1 to=180 evalue=3.2e-74 interpro_id=IPR002132 interpro_description=Ribosomal protein L5 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S RIBOSOMAL PROTEIN L5 (db=HMMPanther db_id=PTHR11994:SF4 from=1 to=180 evalue=3.2e-74)
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ACD43_42_4
uncultured bacterium, Bacteria
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Not on your lists |
comp(947..1258)
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rplX; 50S ribosomal protein L24
rplX_bact: ribosomal protein L24 (db=HMMTigr db_id=TIGR01079 from=1 to=103 evalue=2.5e-39 interpro_id=IPR003256 interpro_description=Ribosomal protein L24 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
MITOCHONDRIAL RIBOSOMAL PROTEIN L24 (db=HMMPanther db_id=PTHR12903 from=3 to=103 evalue=8.1e-37 interpro_id=IPR003256 interpro_description=Ribosomal protein L24 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Translation proteins SH3-like domain (db=superfamily db_id=SSF50104 from=3 to=102 evalue=7.7e-32 interpro_id=IPR008991 interpro_description=Translation protein SH3-like)
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ACD43_42_5
uncultured bacterium, Bacteria
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Not on your lists |
comp(1255..1626)
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50S ribosomal protein L14
rplN_bact: ribosomal protein L14 (db=HMMTigr db_id=TIGR01067 from=1 to=123 evalue=1.6e-74 interpro_id=IPR005745 interpro_description=Ribosomal protein L14, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
50S/60S RIBOSOMAL PROTEIN L14/L23 (db=HMMPanther db_id=PTHR11761 from=1 to=123 evalue=1.4e-63 interpro_id=IPR000218 interpro_description=Ribosomal protein L14b/L23e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S RIBOSOMAL PROTEIN L14 (db=HMMPanther db_id=PTHR11761:SF3 from=1 to=123 evalue=1.4e-63 interpro_id=IPR005745 interpro_description=Ribosomal protein L14, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
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ACD43_42_6
uncultured bacterium, Bacteria
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Not on your lists |
comp(1623..1865)
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rpsQ; 30S ribosomal protein S17
S17_bact: 30S ribosomal protein S17 (db=HMMTigr db_id=TIGR03635 from=4 to=75 evalue=5.5e-35 interpro_id=IPR019984 interpro_description=Ribosomal protein S17, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S17 (db=HMMPfam db_id=PF00366 from=9 to=75 evalue=3.3e-24 interpro_id=IPR000266 interpro_description=Ribosomal protein S17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=2 to=75 evalue=1.0e-22 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
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ACD43_42_7
uncultured bacterium, Bacteria
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Not on your lists |
comp(1862..2044)
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seg (db=Seg db_id=seg from=9 to=27)
coiled-coil (db=Coil db_id=coil from=11 to=32 evalue=NA)
Ribosomal_L29 (db=HMMPfam db_id=PF00831 from=3 to=59 evalue=7.6e-17 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein L29 (L29p) (db=superfamily db_id=SSF46561 from=1 to=59 evalue=1.0e-14 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD43_42_8
uncultured bacterium, Bacteria
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Not on your lists |
comp(2041..2448)
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ribosomal protein L16, bacterial/organelle
seg (db=Seg db_id=seg from=78 to=88)
RIBOSOMAL_L16_2 (db=PatternScan db_id=PS00701 from=82 to=93 evalue=0.0 interpro_id=IPR020798 interpro_description=Ribosomal protein L16, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplP_bact: ribosomal protein L16 (db=HMMTigr db_id=TIGR01164 from=2 to=127 evalue=1.4e-71 interpro_id=IPR000114 interpro_description=Ribosomal protein L16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
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ACD43_42_9
uncultured bacterium, Bacteria
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Not on your lists |
comp(2454..3206)
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rpsC; small subunit ribosomal protein S3
RIBOSOMAL_S3 (db=PatternScan db_id=PS00548 from=167 to=201 evalue=0.0 interpro_id=IPR018280 interpro_description=Ribosomal protein S3, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsC_bact: ribosomal protein S3 (db=HMMTigr db_id=TIGR01009 from=1 to=215 evalue=5.2e-94 interpro_id=IPR005704 interpro_description=Ribosomal protein S3, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
CHLOROPLAST 30S RIBOSOMAL PROTEIN S3 (db=HMMPanther db_id=PTHR11760:SF10 from=86 to=237 evalue=5.6e-55)
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ACD43_42_10
uncultured bacterium, Bacteria
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Not on your lists |
comp(3191..3523)
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ribosomal protein L22, bacterial type
RIBOSOMAL_L22 (db=PatternScan db_id=PS00464 from=82 to=106 evalue=0.0 interpro_id=IPR018260 interpro_description=Ribosomal protein L22/L17, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L22 (db=HMMPfam db_id=PF00237 from=5 to=106 evalue=7.7e-36 interpro_id=IPR001063 interpro_description=Ribosomal protein L22/L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein L22 (db=superfamily db_id=SSF54843 from=1 to=109 evalue=6.4e-35 interpro_id=IPR001063 interpro_description=Ribosomal protein L22/L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD43_42_11
uncultured bacterium, Bacteria
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Not on your lists |
comp(3530..3868)
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rpsS; 30S ribosomal protein S19
seg (db=Seg db_id=seg from=14 to=29)
seg (db=Seg db_id=seg from=88 to=106)
RIBOSOMAL_S19 (db=PatternScan db_id=PS00323 from=53 to=77 evalue=0.0 interpro_id=IPR020934 interpro_description=Ribosomal protein S19 conserved site GO=Molecular Function: RNA binding (GO:0003723))
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ACD43_42_12
uncultured bacterium, Bacteria
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Not on your lists |
comp(3873..3989)
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3873..3989 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD75903.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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