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ACD43_44

Alias: ACD43_82604.6929.8

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD43_44_1

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comp(1..93)
DNA (93bp) protein (31aa)
1..93 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD75958.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD43_44_2

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276..1346
DNA (1071bp) protein (357aa)
thiamine-binding periplasmic protein
Thiamin transporter substrate binding subunit n=1 Tax=Vibrio shilonii AK1 RepID=A6D4B7_9VIBR (db=UNIREF evalue=1.0e-49 bit_score=200.0 identity=36.04 coverage=83.4733893557423)
seg (db=Seg db_id=seg from=21 to=45)
sfuA: ABC transporter periplasmic binding pr (db=HMMTigr db_id=TIGR01254 from=39 to=349 evalue=2.6e-68 interpro_id=IPR005948 interpro_description=Thiamine ABC transporter periplasmic binding protein GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: outer membrane-bounded periplasmic space (GO:0030288))
ACD43_44_3

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1319..2731
DNA (1413bp) protein (471aa)
thiamine ABC transporter inner membrane subunit
transmembrane_regions (db=TMHMM db_id=tmhmm from=442 to=464)
transmembrane_regions (db=TMHMM db_id=tmhmm from=403 to=422)
transmembrane_regions (db=TMHMM db_id=tmhmm from=344 to=363)
ACD43_44_4

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2709..3413
DNA (705bp) protein (235aa)
lipase
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=131 to=145 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=220 evalue=6.9e-71)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=4 to=209 evalue=1.0e-58)
ACD43_44_5

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comp(3422..3754)
DNA (333bp) protein (111aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=84 to=106)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=87 to=103)
ACD43_44_6

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3778..4491
DNA (714bp) protein (238aa)
sensory transcriptional regulator
seg (db=Seg db_id=seg from=7 to=23)
GAF domain-like (db=superfamily db_id=SSF55781 from=9 to=185 evalue=2.9e-27)
no description (db=Gene3D db_id=G3DSA:3.30.450.40 from=15 to=192 evalue=5.0e-24)
ACD43_44_7

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4638..5954
DNA (1317bp) protein (439aa)
Glutamine synthetase, type I n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UBF8_9DELT (db=UNIREF evalue=1.0e-136 bit_score=490.0 identity=53.42 coverage=99.3166287015945)
glnA; Glutamine synthetase (EC:6.3.1.2)
glnA; Glutamine synthetase (EC:6.3.1.2)
GLNA_ATP (db=PatternScan db_id=PS00181 from=226 to=241 evalue=0.0 interpro_id=IPR008146 interpro_description=Glutamine synthetase, catalytic domain GO=Molecular Function: glutamate-ammonia ligase activity (GO:0004356), Biological Process: nitrogen compound metabolic process (GO:0006807))
ACD43_44_8

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comp(6051..6296)
DNA (246bp) protein (82aa)
SP0561-like (db=superfamily db_id=SSF140683 from=1 to=73 evalue=5.2e-06)
DUF1858 (db=HMMPfam db_id=PF08984 from=3 to=54 evalue=3.3e-05 interpro_id=IPR015077 interpro_description=Domain of unknown function DUF1858)
Uncharacterized protein {ECO:0000313|EMBL:EKD75965.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD43_44_9

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comp(6287..6961)
DNA (675bp) protein (225aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=181 to=203)
transmembrane_regions (db=TMHMM db_id=tmhmm from=139 to=161)
transmembrane_regions (db=TMHMM db_id=tmhmm from=96 to=118)
Displaying 9 items

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