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ACD43_80

Alias: ACD43_272319.18934.7

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD43_80_1
ACD43, ACD43, ACD43, ACD43, Parcubacteria, Bacteria

Not on your lists

comp(3..101)
DNA (99bp) protein (33aa)
3..101 - (rbs_motif=None rbs_spacer=None)
ACD43_80_2

Not on your lists

293..1468
DNA (1176bp) protein (392aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXG5_9PROT (db=UNIREF evalue=2.0e-93 bit_score=346.0 identity=44.06 coverage=97.1938775510204)
Six-hairpin glycosidases (db=superfamily db_id=SSF48208 from=19 to=384 evalue=1.5e-28 interpro_id=IPR008928 interpro_description=Six-hairpin glycosidase-like GO=Molecular Function: catalytic activity (GO:0003824))
ACD43_80_3

Not on your lists

1480..2316
DNA (837bp) protein (279aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Nitrosococcus halophilus Nc4 RepID=D5BWI0_NITHN (db=UNIREF evalue=2.0e-64 bit_score=249.0 identity=47.06 coverage=95.6989247311828)
HAD-superfamily hydrolase
S6PP (db=HMMPfam db_id=PF05116 from=10 to=276 evalue=2.6e-51 interpro_id=IPR006380 interpro_description=Sucrose-phosphate synthase)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=7 to=278 evalue=5.2e-26)
ACD43_80_4

Not on your lists

2597..3886
DNA (1290bp) protein (430aa)
glycogen/starch synthase, ADP-glucose type
glgA: glycogen/starch synthases, ADP-glucose (db=HMMTigr db_id=TIGR02095 from=1 to=427 evalue=6.0e-95 interpro_id=IPR011835 interpro_description=Glycogen/starch synthases, ADP-glucose type GO=Molecular Function: starch synthase activity (GO:0009011), Biological Process: glucan biosynthetic process (GO:0009250))
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=82 to=429 evalue=6.4e-94)
STARCH SYNTHASE (db=HMMPanther db_id=PTHR12526:SF17 from=82 to=429 evalue=6.4e-94)
ACD43_80_5

Not on your lists

comp(4025..4672)
DNA (648bp) protein (216aa)
DSBA oxidoreductase
seg (db=Seg db_id=seg from=105 to=115)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=32 to=212 evalue=4.1e-36 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
ACD43_80_6

Not on your lists

comp(4656..5087)
DNA (432bp) protein (144aa)
disulfide bond formation protein DsbB
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=56)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD43_80_7

Not on your lists

comp(5111..6808)
DNA (1698bp) protein (566aa)
hypothetical protein
hypothetical protein
Putative lipoprotein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RP55_ACCPU (db=UNIREF evalue=1.0e-107 bit_score=394.0 identity=43.32 coverage=93.8162544169611)
seg (db=Seg db_id=seg from=496 to=507)
ACD43_80_8

Not on your lists

7316..9082
DNA (1767bp) protein (589aa)
glgP; alpha-glucan phosphorylase (EC:2.4.1.1)
glgP; alpha-glucan phosphorylase (EC:2.4.1.1)
Alpha-glucan phosphorylases n=2 Tax=Synechococcus RepID=Q2JIE5_SYNJB (db=UNIREF evalue=5.0e-116 bit_score=422.0 identity=39.38 coverage=95.2461799660441)
more_P_ylases: alpha-glucan phosphoryla (db=HMMTigr db_id=TIGR02094 from=15 to=565 evalue=6.1e-187 interpro_id=IPR011834 interpro_description=Alpha-glucan phosphorylase GO=Molecular Function: phosphorylase activity (GO:0004645), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: pyridoxal phosphate binding (GO:0030170))
ACD43_80_9

Not on your lists

comp(9188..10657)
DNA (1470bp) protein (490aa)
FG-GAP repeat-containing protein
FG-GAP repeat protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W780_DYAFD (db=UNIREF evalue=8.0e-36 bit_score=155.0 identity=38.07 coverage=74.4897959183673)
seg (db=Seg db_id=seg from=449 to=463)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
ACD43_80_10

Not on your lists

comp(10677..11681)
DNA (1005bp) protein (335aa)
ATPase AAA
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=312 to=323)
ATP-DEPENDENT CLP PROTEASE (db=HMMPanther db_id=PTHR11638 from=26 to=286 evalue=6.8e-116)
ACD43_80_11

Not on your lists

comp(11709..12974)
DNA (1266bp) protein (422aa)
peptidase U32
peptidase U32
Peptidase U32 n=1 Tax=Thermincola sp. JR RepID=D5X823_9FIRM (db=UNIREF evalue=1.0e-83 bit_score=314.0 identity=45.45 coverage=89.3364928909953)
seg (db=Seg db_id=seg from=283 to=294)
ACD43_80_12

Not on your lists

comp(12996..14303)
DNA (1308bp) protein (436aa)
hypothetical protein
seg (db=Seg db_id=seg from=168 to=179)
Oligoxyloglucan reducing end-specific cellobiohydrolase (db=superfamily db_id=SSF110296 from=15 to=332 evalue=1.5e-35)
no description (db=Gene3D db_id=G3DSA:2.130.10.140 from=7 to=200 evalue=2.8e-14)
ACD43_80_13

Not on your lists

comp(14636..15340)
DNA (705bp) protein (235aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=217 to=230)
Sialidases (db=superfamily db_id=SSF50939 from=43 to=214 evalue=1.3e-20 interpro_id=IPR011040 interpro_description=Neuraminidase)
no description (db=Gene3D db_id=G3DSA:2.130.10.140 from=20 to=172 evalue=1.1e-11)
ACD43_80_14

Not on your lists

15429..16088
DNA (660bp) protein (220aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=156 to=178)
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=99)
seg (db=Seg db_id=seg from=76 to=87)
ACD43_80_15

Not on your lists

16109..17227
DNA (1119bp) protein (373aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=334 to=353)
transmembrane_regions (db=TMHMM db_id=tmhmm from=307 to=329)
transmembrane_regions (db=TMHMM db_id=tmhmm from=264 to=286)
seg (db=Seg db_id=seg from=311 to=352)
ACD43_80_16

Not on your lists

17232..17729
DNA (498bp) protein (166aa)
transcription elongation factor GreA
seg (db=Seg db_id=seg from=22 to=44)
coiled-coil (db=Coil db_id=coil from=25 to=46 evalue=NA)
coiled-coil (db=Coil db_id=coil from=61 to=89 evalue=NA)
ACD43_80_17

Not on your lists

17821..18945
DNA (1125bp) protein (375aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=257 to=271)
seg (db=Seg db_id=seg from=66 to=81)
seg (db=Seg db_id=seg from=27 to=48)
Displaying 17 items

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