Alias: ACD43_332471.2150.6
name | lists | location/seqs | annotations | notes |
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ACD43_140_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(2..250)
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50S ribosomal protein L1
Ribosomal_L1 (db=HMMPfam db_id=PF00687 from=17 to=80 evalue=3.5e-18 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396))
50S RIBOSOMAL PROTEIN L1P (db=HMMPanther db_id=PTHR23105:SF5 from=20 to=77 evalue=5.4e-18)
RIBOSOMAL PROTEIN L7AE FAMILY MEMBER (db=HMMPanther db_id=PTHR23105 from=20 to=77 evalue=5.4e-18)
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ACD43_140_2
uncultured bacterium, Bacteria
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Not on your lists |
comp(761..1306)
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nusG; transcription antitermination factor
NUSG (db=PatternScan db_id=PS01014 from=164 to=173 evalue=0.0 interpro_id=IPR015869 interpro_description=Transcription antitermination protein, NusG, bacteria, conserved site)
nusG: transcription termination/antiterminat (db=HMMTigr db_id=TIGR00922 from=12 to=181 evalue=4.0e-80 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=HMMSmart db_id=SM00738 from=9 to=117 evalue=3.1e-49 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968))
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ACD43_140_3
uncultured bacterium, Bacteria
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Not on your lists |
comp(1319..1510)
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seg (db=Seg db_id=seg from=33 to=44)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
SECE_SEC61G (db=PatternScan db_id=PS01067 from=8 to=36 evalue=0.0 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
SecE (db=HMMPfam db_id=PF00584 from=7 to=59 evalue=3.0e-21 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
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ACD43_140_4
uncultured bacterium, Bacteria
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Not on your lists |
comp(1688..1894)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
DUF46 (db=HMMPfam db_id=PF01864 from=1 to=68 evalue=1.3e-07 interpro_id=IPR002726 interpro_description=Protein of unknown function DUF46)
Uncharacterized protein {ECO:0000313|EMBL:EKD76240.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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