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rifoxya1_sub10_scaffold_142

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_sub10_scaffold_142_1
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(55..570)
DNA (516bp) protein (172aa)
seg 154..168 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
seg 154..168 alias=ACD24_6511.2515.9G0002,ACD24_6511.2515.9_2,ACD24_C00049G00002 id=27786 tax=ACD24 species=WWE3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3 organism_desc=WWE3
rifoxya1_sub10_scaffold_142_2

Not on your lists

comp(852..1106)
DNA (255bp) protein (85aa)
RNP-1 like protein RNA-binding protein {ECO:0000313|EMBL:AHB40472.1}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
RNP-1 like protein RNA-binding protein
RNP-1 like RNA-binding protein alias=RAAC2_WWE3_C00001G00527,RAAC2_WWE3_527 id=725574 tax=RAAC2_WWE3 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=WWE3
rifoxya1_sub10_scaffold_142_3
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

1361..1630
DNA (270bp) protein (90aa)
transcriptional regulator; K03892 ArsR family transcriptional regulator Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
transcriptional regulator; K03892 ArsR family transcriptional regulator alias=RAAC2_WWE3_C00001G00528,RAAC2_WWE3_528 id=725575 tax=RAAC2_WWE3 species=Agrobacterium tumefaciens genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=WWE3
rifoxya1_sub10_scaffold_142_4
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

1627..1884
DNA (258bp) protein (86aa)
YruB family glutaredoxin-like protein Tax=RIFOXYD2_FULL_WWE3_43_10_curated
glutaredoxin
glutaredoxin alias=RAAC2_WWE3_C00001G00529,RAAC2_WWE3_529 id=725576 tax=RAAC2_WWE3 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae organism_group=WWE3
rifoxya1_sub10_scaffold_142_5
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

1974..2174
DNA (201bp) protein (67aa)
YruB family glutaredoxin-like protein Tax=RIFOXYD2_FULL_WWE3_43_10_curated
glutaredoxin
glutaredoxin alias=RAAC2_WWE3_C00001G00529,RAAC2_WWE3_529 id=725576 tax=RAAC2_WWE3 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae organism_group=WWE3
rifoxya1_sub10_scaffold_142_6
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(2163..2657)
DNA (495bp) protein (165aa)
Phosphotyrosine protein phosphatases I 2..140 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
Phosphotyrosine protein phosphatases I 2..140 alias=RAAC2_WWE3_C00001G00530,RAAC2_WWE3_530 id=725577 tax=RAAC2_WWE3 organism_group=WWE3 rbh
rifoxya1_sub10_scaffold_142_7
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(2691..3497)
DNA (807bp) protein (269aa)
tetrahydrofolate dehydrogenase/cyclohydrolase domain-containing protein (EC:3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4
tetrahydrofolate dehydrogenase/cyclohydrolase domain protein (EC:3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] alias=ACD24_C00237G00003,ACD24_16241.2149.8G0003,ACD24_16241.2149.8_3 id=28858 tax=ACD24 species=Bacillus megaterium genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=WWE3 organism_desc=WWE3 rbh
hypothetical protein
rifoxya1_sub10_scaffold_142_8
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(3832..4440)
DNA (609bp) protein (203aa)
Peptidase M50 n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RSU2_9BACT rbh
peptidase M50 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
peptidase M50
rifoxya1_sub10_scaffold_142_9
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

4486..4749
DNA (264bp) protein (88aa)
Protein translocase subunit SecE Tax=RIFOXYD2_FULL_WWE3_43_10_curated
transmembrane_regions 26..48 alias=ACD24_C00163G00004,ACD24_19472.5815.19_4,ACD24_19472.5815.19G0004 id=28501 tax=ACD24 species=WWE3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3 organism_desc=WWE3
Preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
rifoxya1_sub10_scaffold_142_10
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

4753..5379
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RT25_9BACT rbh
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
rifoxya1_sub10_scaffold_142_11
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists


5405..5845
DNA (441bp) protein (147aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 alias=RAAC2_WWE3_C00001G00535,RAAC2_WWE3_535 id=725582 tax=RAAC2_WWE3 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia organism_group=WWE3
rifoxya1_sub10_scaffold_142_12
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists


5848..6474
DNA (627bp) protein (209aa)
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
rplA; 50S ribosomal protein L1
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 alias=RAAC2_WWE3_C00001G00536,RAAC2_WWE3_536 id=725583 tax=RAAC2_WWE3 species=Mesoplasma florum genus=Mesoplasma taxon_order=Entomoplasmatales taxon_class=Mollicutes phylum=Tenericutes organism_group=WWE3 rbh
rifoxya1_sub10_scaffold_142_13
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(6523..6783)
DNA (261bp) protein (87aa)
ATPase, F1 complex, delta/epsilon subunit, N-terminal 9..83 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
ATPase, F1 complex, delta/epsilon subunit, N-terminal 9..83 alias=RAAC2_WWE3_C00001G00537,RAAC2_WWE3_537 id=725584 tax=RAAC2_WWE3 organism_group=WWE3
rifoxya1_sub10_scaffold_142_14
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(6791..8176)
DNA (1386bp) protein (462aa)
lpl:lp_2364 atpD; H(+)-transporting two-sector ATPase, beta subunit; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] alias=RAAC2_WWE3_C00001G00538,RAAC2_WWE3_538 id=725585 tax=RAAC2_WWE3 species=unknown genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes organism_group=WWE3 rbh
ATP synthase, F1 beta subunit Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
rifoxya1_sub10_scaffold_142_15
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(8167..9024)
DNA (858bp) protein (286aa)
atpG; ATP synthase F0F1 subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=RIFOXYD2_FULL_WWE3_43_10_curated
atpG; ATP synthase F0F1 subunit gamma (EC:3.6.3.14)
atpG; ATP synthase F0F1 subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] alias=RAAC2_WWE3_C00001G00539,RAAC2_WWE3_539 id=725586 tax=RAAC2_WWE3 species=Laribacter hongkongensis genus=Laribacter taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=WWE3 rbh
rifoxya1_sub10_scaffold_142_16
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(9027..10532)
DNA (1506bp) protein (502aa)
ATP synthase subunit alpha; K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] Tax=RIFOXYD2_FULL_WWE3_43_10_curated
dte:Dester_1251 ATP synthase subunit alpha; K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] alias=RAAC2_WWE3_C00001G00540,RAAC2_WWE3_540 id=725587 tax=RAAC2_WWE3 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown organism_group=WWE3 rbh
hypothetical protein
rifoxya1_sub10_scaffold_142_17
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(10534..11004)
DNA (471bp) protein (157aa)
hypothetical protein Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
hypothetical protein alias=RAAC2_WWE3_C00001G00541,RAAC2_WWE3_541 id=725588 tax=RAAC2_WWE3 organism_group=WWE3
rifoxya1_sub10_scaffold_142_18
GWB2_WWE3_43_22_part, WWE3, Bacteria

Not on your lists

comp(11011..11757)
DNA (747bp) protein (249aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT10097.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
hypothetical protein
coiled-coil 170..198 alias=RAAC2_WWE3_C00001G00542,RAAC2_WWE3_542 id=725589 tax=RAAC2_WWE3 organism_group=WWE3 rbh
rifoxya1_sub10_scaffold_142_19
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(11767..12579)
DNA (813bp) protein (271aa)
transmembrane_regions 191..213 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
transmembrane_regions 191..213 alias=RAAC2_WWE3_C00001G00543,RAAC2_WWE3_543 id=725590 tax=RAAC2_WWE3 organism_group=WWE3 rbh
Displaying 19 items

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