ggKbase home page

rifoxya1_sub10_scaffold_205

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_sub10_scaffold_205_1
unknown

Not on your lists

comp(2..70)
DNA (69bp) protein (23aa)

This feature has no annotations

rifoxya1_sub10_scaffold_205_2
GWE1_OP11_35_20, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(49..1545)
DNA (1497bp) protein (499aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP73518.1}; TaxID=1618596 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWE1_35_20.;"
alias=OP11_1_248 id=5086788 tax=OP11_1 organism_desc=Complete genome rbh
rifoxya1_sub10_scaffold_205_3
GWE1_OP11_35_20, Woesebacteria, Microgenomates, Bacteria

Not on your lists

1546..2490
DNA (945bp) protein (315aa)
UDP-glucuronate decarboxylase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZC6_THERP alias=OP11_1_247 id=5086787 tax=OP11_1 species=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi organism_desc=Complete genome rbh
UDP-glucuronate decarboxylase {ECO:0000313|EMBL:KKP73517.1}; TaxID=1618596 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWE1_35_20.;"
UDP-glucuronate decarboxylase
rifoxya1_sub10_scaffold_205_4
GWE1_OP11_35_20, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(2494..3996)
DNA (1503bp) protein (501aa)
hypothetical protein cdiviTM7_00321 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25AF alias=OP11_1_246 id=5086786 tax=OP11_1 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=Complete genome rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP73516.1}; TaxID=1618596 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWE1_35_20.;"
hypothetical protein
rifoxya1_sub10_scaffold_205_5
GWC2_OP11_31_9, Woesebacteria, Microgenomates, Bacteria

Not on your lists


comp(3993..5390)
DNA (1398bp) protein (466aa)
Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVA9_9BACT alias=OP11_1_245 id=5086785 tax=OP11_1 species=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=Complete genome rbh
Methionyl-tRNA synthetase {ECO:0000313|EMBL:KKP31172.1}; TaxID=1618586 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_31_9.;"
hypothetical protein
rifoxya1_sub10_scaffold_205_6
GWE2_OP11_31_6 , Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(5468..5638)
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP30901.1}; TaxID=1618599 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWE2_31_6.;"
alias=OP11_1_244 id=5086784 tax=OP11_1 organism_desc=Complete genome
rifoxya1_sub10_scaffold_205_7
GWE1_OP11_35_20, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(5717..6067)
DNA (351bp) protein (117aa)
TrpR-related protein YerC/YecD n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M1G2_CLOCD alias=OP11_1_243 id=5086783 tax=OP11_1 species=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_desc=Complete genome
TrpR-related protein YerC/YecD {ECO:0000313|EMBL:KKP73513.1}; TaxID=1618596 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWE1_35_20.;"
TrpR-related protein YerC/YecD
rifoxya1_sub10_scaffold_205_8
GWE2_OP11_31_6 , Woesebacteria, Microgenomates, Bacteria

Not on your lists

6099..6308
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP30903.1}; TaxID=1618599 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWE2_31_6.;"
alias=OP11_1_242 id=5086782 tax=OP11_1 organism_desc=Complete genome
rifoxya1_sub10_scaffold_205_9
GWC2_OP11_31_9, Woesebacteria, Microgenomates, Bacteria

Not on your lists

6473..7384
DNA (912bp) protein (304aa)
Putative DNA recombination protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVA7_9BACT alias=OP11_1_241 id=5086781 tax=OP11_1 species=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=Complete genome rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP31176.1}; TaxID=1618586 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_31_9.;"
hypothetical protein
rifoxya1_sub10_scaffold_205_10
RIFOXYA1_FULL_OP11_Woesebacteria_31_71_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

7428..7946
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLR2_9BACT alias=OP11_1_240 id=5086780 tax=OP11_1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=Complete genome
hypothetical protein Tax=RIFOXYA1_FULL_OP11_Woesebacteria_31_71_curated
hypothetical protein
rifoxya1_sub10_scaffold_205_11
GWE1_OP11_35_20, Woesebacteria, Microgenomates, Bacteria

Not on your lists

7891..9405
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLR2_9BACT alias=OP11_1_240 id=5086780 tax=OP11_1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=Complete genome rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP73510.1}; TaxID=1618596 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWE1_35_20.;"
hypothetical protein
rifoxya1_sub10_scaffold_205_12
GWE2_OP11_31_6 , Woesebacteria, Microgenomates, Bacteria

Not on your lists

9392..10345
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLR2_9BACT alias=OP11_1_240 id=5086780 tax=OP11_1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKP30158.1}; Flags: Fragment;; TaxID=1618599 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWE2_31_6.;"
hypothetical protein
rifoxya1_sub10_scaffold_205_13
GWE1_OP11_35_20, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(10348..10611)
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Caulobacter RepID=R0CWQ5_CAUCE alias=OP11_1_239 id=5086779 tax=OP11_1 species=Caulobacter genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_desc=Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKP73509.1}; TaxID=1618596 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWE1_35_20.;"
hypothetical protein
rifoxya1_sub10_scaffold_205_14
GWE2_OP11_31_6 , Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(10684..10986)
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP30160.1}; TaxID=1618599 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWE2_31_6.;"
alias=OP11_1_238 id=5086778 tax=OP11_1 organism_desc=Complete genome
rifoxya1_sub10_scaffold_205_15
GWC2_OP11_31_9, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(10976..11875)
DNA (900bp) protein (300aa)
Putative methicillin resistance protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PN34_9FIRM alias=OP11_1_237 id=5086777 tax=OP11_1 species=Thermaerobacter subterraneus DSM 13965 genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_desc=Complete genome rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP31180.1}; TaxID=1618586 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_31_9.;"
FemAB family peptidoglycan biosynthesis protein
rifoxya1_sub10_scaffold_205_16
RIFOXYA1_FULL_OP11_Woesebacteria_31_71_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(11875..12789)
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=Treponema denticola RepID=M2AFZ2_TREDN alias=OP11_1_236 id=5086776 tax=OP11_1 species=Treponema denticola genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_desc=Complete genome rbh
femAB Tax=RIFOXYA1_FULL_OP11_Woesebacteria_31_71_curated
femAB
rifoxya1_sub10_scaffold_205_17
GWE1_OP11_35_20, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(12835..14688)
DNA (1854bp) protein (618aa)
ATP-dependent DNA helicase PcrA n=2 Tax=Thermoanaerobacterium thermosaccharolyticum RepID=D9TQN4_THETC alias=OP11_1_235 id=5086775 tax=OP11_1 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_desc=Complete genome rbh
ATP-dependent DNA helicase PcrA {ECO:0000313|EMBL:KKP73505.1}; TaxID=1618596 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWE1_35_20.;"
hypothetical protein
rifoxya1_sub10_scaffold_205_18
GWE1_OP11_35_20, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(14663..15514)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KD07_9BACT alias=OP11_1_234 id=5086774 tax=OP11_1 species=Fibrella aestuarina BUZ 2 genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes organism_desc=Complete genome rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP73504.1}; TaxID=1618596 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWE1_35_20.;"
hypothetical protein
rifoxya1_sub10_scaffold_205_19

Not on your lists

15533..16519
DNA (987bp) protein (329aa)
Cell envelope-related transcriptional attenuator(LytR/CpsA family) n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KXR1_9ACTO alias=OP11_1_233 id=5086773 tax=OP11_1 species=Micromonospora lupini str. Lupac 08 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_desc=Complete genome rbh
Cell envelope-related transcriptional attenuator(LytR/CpsA family) {ECO:0000313|EMBL:KKP33892.1}; TaxID=1618603 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW
cell envelope-related transcriptional attenuator
rifoxya1_sub10_scaffold_205_20
GWE1_OP11_35_20, Woesebacteria, Microgenomates, Bacteria

Not on your lists

16516..17601
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4D6_9BACT alias=OP11_1_232 id=5086772 tax=OP11_1 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes organism_desc=Complete genome rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP73502.1}; TaxID=1618596 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWE1_35_20.;"
hypothetical protein
rifoxya1_sub10_scaffold_205_21
GWE1_OP11_35_20, Woesebacteria, Microgenomates, Bacteria

Not on your lists

17588..18262
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4D6_9BACT alias=OP11_1_232 id=5086772 tax=OP11_1 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes organism_desc=Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKP73502.1}; TaxID=1618596 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWE1_35_20.;"
rifoxya1_sub10_scaffold_205_22
GWE1_OP11_35_20, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(18234..19394)
DNA (1161bp) protein (387aa)
Putative uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LGZ9_HALO1 alias=OP11_1_231 id=5086771 tax=OP11_1 species=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_desc=Complete genome rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP73501.1}; TaxID=1618596 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWE1_35_20.;"
hypothetical protein
rifoxya1_sub10_scaffold_205_23
RIFOXYA1_FULL_OP11_Woesebacteria_31_71_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(19370..20320)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MTL5_CORCM alias=OP11_1_230 id=5086770 tax=OP11_1 species=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_desc=Complete genome rbh
hypothetical protein Tax=RIFOXYA1_FULL_OP11_Woesebacteria_31_71_curated
hypothetical protein
rifoxya1_sub10_scaffold_205_24

Not on your lists

20552..22981
DNA (2430bp) protein (810aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase family protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q605T5_METCA alias=OP11_1_229 id=5086769 tax=OP11_1 species=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_desc=Complete genome rbh
Dolichyl-phosphate-mannose-protein mannosyltransferase family protein {ECO:0000313|EMBL:KKP33896.1}; TaxID=1618603 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium
dolichyl-phosphate-mannose-protein mannosyltransferase
rifoxya1_sub10_scaffold_205_25
RIFOXYA1_FULL_OP11_Woesebacteria_31_71_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(23053..23154)
DNA (102bp) protein (34aa)
Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V7F8_MONBE alias=OP11_1_438 id=5086978 tax=OP11_1 species=Monosiga brevicollis genus=Monosiga taxon_order=Choanoflagellida taxon_class=unknown phylum=unknown organism_desc=Complete genome
hypothetical protein Tax=RIFOXYA1_FULL_OP11_Woesebacteria_31_71_curated
Displaying 25 items

View Taxonomy