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GD18-4_B1_scaffold_425428

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_425428_1
unknown

Not on your lists

2..76
DNA (75bp) protein (25aa)

This feature has no annotations

GD18-4_B1_scaffold_425428_2
GWF2_OD1_44_350, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

170..1420
DNA (1251bp) protein (417aa)
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=uncultured bacterium RepID=K2EPZ9_9BACT
Serine hydroxymethyltransferase {ECO:0000313|EMBL:KKT69714.1}; TaxID=1619000 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWF2_44_350.;"
GD18-4_B1_scaffold_425428_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1433..2464
DNA (1032bp) protein (344aa)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EDS12873.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EDS12873.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
DNA polymerase III, delta subunit n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6P8_9FIRM
GD18-4_B1_scaffold_425428_trna_3
unknown

Not on your lists

comp(2839..2912)
DNA (74bp)
transferRNA Asp
GD18-4_B1_scaffold_425428_4
R_PER_46_8, Bacteria

Not on your lists

comp(2953..3675)
DNA (723bp) protein (241aa)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QRG8_NOSS7
prolipoprotein diacylglyceryl transferase
Tax=RIFCSPHIGHO2_01_FULL_PER_46_8_curated
GD18-4_B1_scaffold_425428_5
unknown

Not on your lists

comp(3731..4888)
DNA (1158bp) protein (386aa)

This feature has no annotations

GD18-4_B1_scaffold_425428_6
RIFOXYC2_FULL_OD1_Falkowbacteria_48_21_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4885..6267)
DNA (1383bp) protein (461aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=uncultured bacterium RepID=K2BD11_9BACT
Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_48_21_curated
GD18-4_B1_scaffold_425428_7
R_OD1_Uhrbacteria_49_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6494..8140)
DNA (1647bp) protein (549aa)
hypothetical protein id=5801477 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
chaperonin GroEL
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_49_11_curated
GD18-4_B1_scaffold_425428_8
CG_Falkow_04, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8175..8468)
DNA (294bp) protein (98aa)
10 kDa chaperonin id=2194130 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
chaperonin Cpn10
Tax=CG_Falkow_04
GD18-4_B1_scaffold_425428_9
R_RIF_OD1_03_45_10, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(8553..9878)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B43E26
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_45_10_curated
GD18-4_B1_scaffold_425428_10
RIFOXYC1_FULL_RIF_OD1_03_37_11_curated, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(9862..10827)
DNA (966bp) protein (322aa)
Uncharacterized protein id=1899418 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFOXYC1_FULL_RIF_OD1_03_37_11_curated
GD18-4_B1_scaffold_425428_11
RIFOXYC2_FULL_OD1_Uhrbacteria_47_19_curated, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

10843..12288
DNA (1446bp) protein (482aa)
peptidase M23 id=120441 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
lipoprotein
Tax=RIFOXYC2_FULL_OD1_Uhrbacteria_47_19_curated
GD18-4_B1_scaffold_425428_12
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(12296..13837)
DNA (1542bp) protein (514aa)
Mg chelatase, subunit ChlI n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8J7_SPHTD
Mg chelatase, subunit ChlI
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:ACZ40140.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
GD18-4_B1_scaffold_425428_13
CG_CPR05_01, CG_CPR05, Bacteria

Not on your lists

13925..14998
DNA (1074bp) protein (358aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RIH1_HALHG
Tax=CG_CPR05_01
GD18-4_B1_scaffold_425428_14
unknown

Not on your lists

comp(14971..15402)
DNA (432bp) protein (144aa)

This feature has no annotations

GD18-4_B1_scaffold_425428_15

Not on your lists

comp(15426..15761)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z2K2_9BACT
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:KKR53232.1}; TaxID=1618816 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_23.;"
TraR/DksA family transcriptional regulator
GD18-4_B1_scaffold_425428_16
unknown

Not on your lists

comp(15801..16115)
DNA (315bp) protein (105aa)

This feature has no annotations

GD18-4_B1_scaffold_425428_17
unknown

Not on your lists

comp(16348..18594)
DNA (2247bp) protein (749aa)

This feature has no annotations

GD18-4_B1_scaffold_425428_18
R_OD1_Uhrbacteria_48_12, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(18824..20968)
DNA (2145bp) protein (715aa)
hypothetical protein id=5801381 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
polyribonucleotide nucleotidyltransferase
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated
GD18-4_B1_scaffold_425428_19
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(20984..21550)
DNA (567bp) protein (189aa)
hypothetical protein id=5464 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein
Tax=CG_CPR12_01
GD18-4_B1_scaffold_425428_20
R_OD1_Uhrbacteria_48_12, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists


comp(21553..21885)
DNA (333bp) protein (111aa)
30S ribosomal protein S15 n=1 Tax=uncultured bacterium RepID=K2EBM9_9BACT
30S ribosomal protein S15
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated
GD18-4_B1_scaffold_425428_21
R_OD1_Uhrbacteria_60_10, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

22059..22862
DNA (804bp) protein (268aa)
tyrosine recombinase XerD subunit; K03733 integrase/recombinase XerC id=3401902 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
tyrosine recombinase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_60_10_curated
GD18-4_B1_scaffold_425428_trna_1
unknown

Not on your lists

22898..22969
DNA (72bp)
transferRNA Arg
GD18-4_B1_scaffold_425428_22
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

22990..23346
DNA (357bp) protein (119aa)
Small multidrug resistance protein n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=A8F6Q2_THELT
small multidrug resistance protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
GD18-4_B1_scaffold_425428_trna_2
unknown

Not on your lists

23352..23422
DNA (71bp)
transferRNA His
GD18-4_B1_scaffold_425428_23
unknown

Not on your lists

comp(23613..24500)
DNA (888bp) protein (296aa)

This feature has no annotations

GD18-4_B1_scaffold_425428_24
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

24704..25066
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UE80_9CYAN
multidrug resistance protein MdtK
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
GD18-4_B1_scaffold_425428_25
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

comp(25158..26285)
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YCU0_9DELT
AAA ATPase
Tax=CG_CPR01_01
GD18-4_B1_scaffold_425428_26
unknown

Not on your lists

comp(26397..26546)
DNA (150bp) protein (50aa)

This feature has no annotations

GD18-4_B1_scaffold_425428_27

Not on your lists

comp(26618..27838)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AZ57_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD67006.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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