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GD18-4_B1_scaffold_1229945

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_1229945_1
GWF2_OD1_41_16, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

1..1035
DNA (1035bp) protein (345aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR97625.1}; TaxID=1618997 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWF2_41_16.;"
id=2090434 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
GD18-4_B1_scaffold_1229945_2
R_OD1_Magasanikbacteria_33_17, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1055..2290)
DNA (1236bp) protein (412aa)
glycoside hydrolase (EC:2.4.1.-)
glycosyltransferase id=120636 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_33_17_curated
GD18-4_B1_scaffold_1229945_3
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2292..3485)
DNA (1194bp) protein (398aa)
Glycosyltransferase id=2169418 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
group 1 glycosyl transferase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
GD18-4_B1_scaffold_1229945_4
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3523..4593)
DNA (1071bp) protein (357aa)
putative glycosyltransferase id=120744 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
family 2 glycosyl transferase
Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
GD18-4_B1_scaffold_1229945_5
unknown

Not on your lists

comp(4595..5164)
DNA (570bp) protein (190aa)

This feature has no annotations

GD18-4_B1_scaffold_1229945_6
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5210..6040)
DNA (831bp) protein (277aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme id=1889001 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
prepilin signal peptidase PulO-like peptidase
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
GD18-4_B1_scaffold_1229945_7
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(6163..6639)
DNA (477bp) protein (159aa)
pilus assembly protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B5D320
gspG; general secretion pathway protein G
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
GD18-4_B1_scaffold_1229945_8

Not on your lists

comp(6763..7980)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B2EF0B
Type II secretion system protein {ECO:0000313|EMBL:KKT98315.1}; TaxID=1618931 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_15.;"
Tfp pilus biogenesis protein PilC
GD18-4_B1_scaffold_1229945_9

Not on your lists


comp(7980..9026)
DNA (1047bp) protein (349aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=uncultured bacterium RepID=K2B605_9BACT
hypothetical protein
GD18-4_B1_scaffold_1229945_10
RHI_RIF_OD1_01_48_17, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(9045..9431)
DNA (387bp) protein (129aa)
transmembrane_regions id=5801226 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_01_48_17_curated
GD18-4_B1_scaffold_1229945_11
unknown

Not on your lists

comp(9437..9922)
DNA (486bp) protein (162aa)

This feature has no annotations

GD18-4_B1_scaffold_1229945_12
unknown

Not on your lists

comp(9919..10233)
DNA (315bp) protein (105aa)

This feature has no annotations

GD18-4_B1_scaffold_1229945_13
Parcubacteria bacterium GW2011_GWB1_43_6, Parcubacteria, Bacteria

Not on your lists

comp(10246..13410)
DNA (3165bp) protein (1055aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT16467.1}; TaxID=1618872 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_6.;"
Uncharacterized protein id=1995527 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
hypothetical protein
GD18-4_B1_scaffold_1229945_14
unknown

Not on your lists

13647..14264
DNA (618bp) protein (206aa)

This feature has no annotations

GD18-4_B1_scaffold_1229945_15
RBG_13_OD1_Moranbacteria_45_13_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14337..14771)
DNA (435bp) protein (145aa)
hypothetical protein id=5801230 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
atpC; F0F1 ATP synthase subunit epsilon
Tax=RBG_13_OD1_Moranbacteria_45_13_curated
GD18-4_B1_scaffold_1229945_16
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14798..16177)
DNA (1380bp) protein (460aa)
atpD; ATP synthase F0F1 subunit beta (EC:3.6.3.14)
hypothetical protein id=5801231 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
GD18-4_B1_scaffold_1229945_17
RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16203..17048)
DNA (846bp) protein (282aa)
ATP synthase F1 subunit gamma (EC:3.6.3.14)
hypothetical protein id=5801232 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated
GD18-4_B1_scaffold_1229945_18
RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(17120..18652)
DNA (1533bp) protein (511aa)
atpA; ATP synthase F0F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=uncultured bacterium RepID=K2FKE3_9BACT
Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated
GD18-4_B1_scaffold_1229945_19
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(18669..19058)
DNA (390bp) protein (130aa)
ATP synthase subunit delta id=4803600 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ATP synthase F1 subcomplex subunit delta
Tax=RBG_16_RIF_CHLX_69_14_curated
GD18-4_B1_scaffold_1229945_20
RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(19084..19587)
DNA (504bp) protein (168aa)
ATP synthase subunit b n=1 Tax=uncultured bacterium RepID=K2AQD5_9BACT
ATP synthase subunit B
Tax=RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated
GD18-4_B1_scaffold_1229945_21
R_OP11_Roizmanbacteria_39_12b, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(19622..19876)
DNA (255bp) protein (85aa)
atpE; ATP synthase subunit c; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] id=5083898 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
atpE; ATP synthase subunit c
Tax=RIFCSPHIGHO2_01_FULL_OP11_Roizmanbacteria_39_12b_curated
GD18-4_B1_scaffold_1229945_22
RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(19907..20647)
DNA (741bp) protein (247aa)
hypothetical protein id=5801237 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
F0F1-type ATPase subunit A
Tax=RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated
GD18-4_B1_scaffold_1229945_23
GWA1_OD1_49_17_curated, Parcubacteria, Bacteria

Not on your lists

comp(20670..20900)
DNA (231bp) protein (77aa)
transmembrane_regions id=5801238 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Tax=GWA1_OD1_49_17_curated
GD18-4_B1_scaffold_1229945_24
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(21130..21954)
DNA (825bp) protein (275aa)
Hydrolase, TatD family id=2169610 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
TatD family hydrolase
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
GD18-4_B1_scaffold_1229945_25

Not on your lists

comp(21964..22740)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A091_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD43379.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
GD18-4_B1_scaffold_1229945_26
RIFOXYB2_FULL_OD1_Uhrbacteria_41_18_curated, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists


comp(22744..24264)
DNA (1521bp) protein (507aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase id=2008871 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
Tax=RIFOXYB2_FULL_OD1_Uhrbacteria_41_18_curated
GD18-4_B1_scaffold_1229945_27
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(24312..25277)
DNA (966bp) protein (322aa)
dihydrouridine synthase dus id=15190426 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
dihydrouridine synthase dus
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
GD18-4_B1_scaffold_1229945_28
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25291..26811)
DNA (1521bp) protein (507aa)
UvrABC system protein C n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CV51_METMJ
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1434120 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae T4/M.;"
Excinuclease ABC subunit C
GD18-4_B1_scaffold_1229945_29
unknown

Not on your lists

26926..27819
DNA (894bp) protein (298aa)

This feature has no annotations

GD18-4_B1_scaffold_1229945_30
unknown

Not on your lists

27906..28265
DNA (360bp) protein (120aa)

This feature has no annotations

Displaying items 1-30 of 43 in total

View Taxonomy