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GD18-4_B1_scaffold_1297869

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_1297869_1
CG_Falkow_04, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1..189)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZHL0_9BACT
Tax=CG_Falkow_04
GD18-4_B1_scaffold_1297869_2
GWA2_OD1_45_39_plus, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(552..2801)
DNA (2250bp) protein (750aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000371E019
Protein TonB {ECO:0000313|EMBL:KKU06949.1}; TaxID=1619041 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_45_39.;"
GD18-4_B1_scaffold_1297869_3
CG_Falkow_03, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2822..6157)
DNA (3336bp) protein (1112aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z334_9BACT
hypothetical protein
Tax=CG_Falkow_03
GD18-4_B1_scaffold_1297869_4
unknown

Not on your lists

comp(6221..6436)
DNA (216bp) protein (72aa)

This feature has no annotations

GD18-4_B1_scaffold_1297869_trna_1
unknown

Not on your lists

6310..6381
DNA (72bp)
transferRNA Undet
GD18-4_B1_scaffold_1297869_5
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(6485..15580)
DNA (9096bp) protein (3032aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2AH85_9BACT
Tax=CG_CPR12_01
GD18-4_B1_scaffold_1297869_6
R_OD1_Falkowbacteria_39_33, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(15599..16459)
DNA (861bp) protein (287aa)
Thrombospondin type 3 repeat id=2026660 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_39_33_curated
GD18-4_B1_scaffold_1297869_7
GWA1_OD1_47_8, Parcubacteria, Bacteria

Not on your lists

comp(16887..17258)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9807 RepID=I4HCD8_MICAE
Uncharacterized protein {ECO:0000313|EMBL:KKU81688.1}; TaxID=1618793 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_8.;"
hypothetical protein
GD18-4_B1_scaffold_1297869_8
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

comp(17268..17432)
DNA (165bp) protein (55aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
GD18-4_B1_scaffold_1297869_9
unknown

Not on your lists

17457..17579
DNA (123bp) protein (41aa)

This feature has no annotations

GD18-4_B1_scaffold_1297869_10
R_SM2F11_43_13b, SM2F11, Bacteria

Not on your lists

comp(17576..18526)
DNA (951bp) protein (317aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] id=86325 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
heat shock protein HtpX (EC:3.4.24.-)
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13b_curated
GD18-4_B1_scaffold_1297869_11
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18582..19160)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036FF977
Membrane protein {ECO:0000313|EMBL:ETR76833.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
GD18-4_B1_scaffold_1297869_12
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(19400..20221)
DNA (822bp) protein (274aa)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=uncultured bacterium RepID=K2F3H8_9BACT
ksgA; dimethyladenosine transferase
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
GD18-4_B1_scaffold_1297869_13
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(20232..21479)
DNA (1248bp) protein (416aa)
hypothetical protein id=5801373 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
GD18-4_B1_scaffold_1297869_14
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

21534..22904
DNA (1371bp) protein (457aa)
Phosphomannomutase id=4038638 bin=GWF2_Planctomycete_41_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
glmM; phosphomannomutase
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
GD18-4_B1_scaffold_1297869_15
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

22976..23815
DNA (840bp) protein (280aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MDT2_9PORP id=2622 bin=ACD11 species=Porphyromonas uenonis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
GD18-4_B1_scaffold_1297869_16
R_SM2F11_43_13, SM2F11, Bacteria

Not on your lists

comp(23851..24054)
DNA (204bp) protein (68aa)
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13_curated
GD18-4_B1_scaffold_1297869_17

Not on your lists

comp(24122..25954)
DNA (1833bp) protein (611aa)
toc:Toce_1227 RNA-metabolising metallo-beta-lactamase; K12574 ribonuclease J [EC:3.1.-.-] id=95824 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:KKS93964.1}; TaxID=1618826 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_13.;"
Zn-dependent hydrolase
GD18-4_B1_scaffold_1297869_trna_2
unknown

Not on your lists

comp(26022..26105)
DNA (84bp)
transferRNA Leu
GD18-4_B1_scaffold_1297869_18
RIFOXYC2_FULL_OD1_Uhrbacteria_47_19_curated, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(26142..27974)
DNA (1833bp) protein (611aa)
extracellular solute-binding protein family 5; K02035 peptide/nickel transport system substrate-binding protein id=53982 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
putative ABC transporter substrate binding protein
Tax=RIFOXYC2_FULL_OD1_Uhrbacteria_47_19_curated
GD18-4_B1_scaffold_1297869_19
R_RIF_OD1_13_47_10, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(28054..28275)
DNA (222bp) protein (74aa)
Preprotein translocase, SecG subunit id=1263717 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_47_10_curated
GD18-4_B1_scaffold_1297869_20
unknown

Not on your lists

comp(28476..28949)
DNA (474bp) protein (158aa)

This feature has no annotations

GD18-4_B1_scaffold_1297869_21
unknown

Not on your lists

comp(28962..29429)
DNA (468bp) protein (156aa)

This feature has no annotations

GD18-4_B1_scaffold_1297869_22

Not on your lists

29540..30235
DNA (696bp) protein (232aa)
DSBA oxidoreductase
DSBA oxidoreductase id=5241602 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DSBA oxidoreductase {ECO:0000313|EMBL:AJF60593.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
GD18-4_B1_scaffold_1297869_23
R_OD1_Uhrbacteria_48_12, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

30316..33189
DNA (2874bp) protein (958aa)
excinuclease ABC subunit A n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B54282
excinuclease ABC subunit A
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated
GD18-4_B1_scaffold_1297869_24
R_SM2F11_43_13b, SM2F11, Bacteria

Not on your lists


33295..36264
DNA (2970bp) protein (990aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K1ZSY9_9BACT
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13b_curated
GD18-4_B1_scaffold_1297869_25
R_OD1_Uhrbacteria_48_12, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

36408..37847
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B73163
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated
GD18-4_B1_scaffold_1297869_26
RIFOXYA2_FULL_RIF_OD1_01_38_24_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

37967..38110
DNA (144bp) protein (48aa)
Serine hydroxymethyltransferase n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FH61_9EURY
glycine/serine hydroxymethyltransferase
Tax=RIFOXYA2_FULL_RIF_OD1_01_38_24_curated
Displaying 28 items

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