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GD18-4_B1_scaffold_2124585

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_2124585_1
unknown

Not on your lists

comp(251..736)
DNA (486bp) protein (162aa)

This feature has no annotations

GD18-4_B1_scaffold_2124585_2
R_OD1_Nomurabacteria_40_15, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

846..1640
DNA (795bp) protein (265aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] id=56451 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
pyrroline-5-carboxylate reductase
Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_40_15_curated
GD18-4_B1_scaffold_2124585_3
unknown

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comp(1655..1888)
DNA (234bp) protein (78aa)

This feature has no annotations

GD18-4_B1_scaffold_2124585_4
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(1995..2969)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E642_9BACT
MGS domain protein {ECO:0000313|EMBL:KKS73293.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
putative hydrolase
GD18-4_B1_scaffold_2124585_5
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(2998..4317)
DNA (1320bp) protein (440aa)
argininosuccinate lyase (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1] id=5095223 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Argininosuccinate lyase, argininosuccinate lyase {ECO:0000313|EMBL:KKP36714.1}; EC=4.3.2.1 {ECO:0000313|EMBL:KKP36714.1};; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
argininosuccinate lyase (EC:4.3.2.1)
GD18-4_B1_scaffold_2124585_6
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(4324..4953)
DNA (630bp) protein (210aa)
cyclophilin-type peptidylprolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Candidatus Actinomarina minuta RepID=S5DYA6_9ACTN
Tax=GWB1_OD1_49_6_curated
GD18-4_B1_scaffold_2124585_7
unknown

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comp(4968..5171)
DNA (204bp) protein (68aa)

This feature has no annotations

GD18-4_B1_scaffold_2124585_8
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

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comp(5191..5577)
DNA (387bp) protein (129aa)
Putative membrane protein id=2670049 bin=GWA1_ZB2_49_26 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
GD18-4_B1_scaffold_2124585_9
R_RIF_OD1_12_48_27, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(5588..6379)
DNA (792bp) protein (264aa)
Voltage-gated potassium channel, Shab-family (KCNB, Kv2-like) alpha-subunit. C. elegans exp-2 ortholog; K04886 potassium voltage-gated channel Shab-related subfamily B member 2 id=5091410 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
potassium channel protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_12_48_27_curated
GD18-4_B1_scaffold_2124585_10
GWA1_OP11_Woesebacteria_41_8_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

6540..7244
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XPA8_STAC7
hypothetical protein
Tax=GWA1_OP11_Woesebacteria_41_8_curated
GD18-4_B1_scaffold_2124585_11
R_OD1_Magasanikbacteria_47_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7297..7737)
DNA (441bp) protein (147aa)
Putative uncharacterized protein id=2019086 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_47_14_curated
GD18-4_B1_scaffold_2124585_12
R_RIF_OD1_07_45_25, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(7767..8801)
DNA (1035bp) protein (345aa)
ABC-3 protein id=3743960 bin=GWF2_Planctomycetes_50_10 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
ABC-3 protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_45_25_curated
GD18-4_B1_scaffold_2124585_13
R_RIF_OD1_07_45_25, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(8758..9486)
DNA (729bp) protein (243aa)
ABC transporter related-protein id=3743961 bin=GWF2_Planctomycetes_50_10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
manganese transporter ATP-binding protein MntA
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_45_25_curated
GD18-4_B1_scaffold_2124585_14
R_RIF_OD1_07_45_25, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(9528..10466)
DNA (939bp) protein (313aa)
ABC transporter substrate binding protein id=3743962 bin=GWF2_Planctomycetes_50_10 species=Caldisericum exile genus=Caldisericum taxon_order=Caldisericales taxon_class=Caldisericia phylum=Caldiserica tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
metal ABC transporter periplasmic protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_45_25_curated
GD18-4_B1_scaffold_2124585_15
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(10554..11588)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI0003677D25
Rhs family protein
Tax=CG_CPR12_01
GD18-4_B1_scaffold_2124585_16

Not on your lists

comp(11593..12012)
DNA (420bp) protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO02780.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transmembrane_regions id=5095848 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
GD18-4_B1_scaffold_2124585_17
GWC2_OD1-i_45_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12028..12468)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B8P8_9BACT
DoxX family protein {ECO:0000313|EMBL:KKT88583.1}; TaxID=1618700 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_45_10.;"
hypothetical protein
GD18-4_B1_scaffold_2124585_18
GWC1_OD1_38_6, Parcubacteria, Bacteria

Not on your lists

12552..13547
DNA (996bp) protein (332aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ75763.1}; TaxID=1618898 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_6.;"
id=3501604 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
GD18-4_B1_scaffold_2124585_19

Not on your lists

comp(13643..14119)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036554EC
Uncharacterized protein {ECO:0000313|EMBL:KKT28459.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
hypothetical protein
GD18-4_B1_scaffold_2124585_20
R_OD1_Giovannonibacteria_46_13, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(14217..14750)
DNA (534bp) protein (178aa)
putative NADH:ubiquinone reductase (H(+)-translocating) (EC:1.6.5.3)
Putative NADH:ubiquinone reductase (H(+)-translocating) n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PVP2_9BACT
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_13_curated
GD18-4_B1_scaffold_2124585_21
R_PER_ii_51_9, PER-ii, Bacteria

Not on your lists

comp(14759..15040)
DNA (282bp) protein (94aa)
Tax=RIFCSPHIGHO2_01_FULL_PER_ii_51_9_curated
GD18-4_B1_scaffold_2124585_22
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(15117..15623)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E8N9_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
GD18-4_B1_scaffold_2124585_23

Not on your lists

comp(15702..16955)
DNA (1254bp) protein (418aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT93014.1}; TaxID=1618832 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_45_14.;"
glutaredoxin id=5803257 bin=OD1_GWC2_34_28 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
glutaredoxin
GD18-4_B1_scaffold_2124585_24
unknown

Not on your lists

comp(16989..17321)
DNA (333bp) protein (111aa)

This feature has no annotations

GD18-4_B1_scaffold_2124585_25
unknown

Not on your lists

comp(17323..17685)
DNA (363bp) protein (121aa)

This feature has no annotations

GD18-4_B1_scaffold_2124585_26

Not on your lists

comp(17936..18883)
DNA (948bp) protein (316aa)
Ornithine carbamoyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVX9_ROSS1
Marine sediment metagenome DNA, contig: S01H1_C00757 {ECO:0000313|EMBL:GAF82147.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ornithine carbamoyltransferase
GD18-4_B1_scaffold_2124585_27
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

comp(18894..19610)
DNA (717bp) protein (239aa)
Argininosuccinate synthase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=E9CFJ4_CAPO3
argininosuccinate synthase
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
Displaying 27 items

View Taxonomy