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GD18-4_B1_scaffold_1183614_10

Organism: GD2018-4_B1_QB3_180703_Uhrbacteria_48_14

near complete RP 41 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(13477..13974)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1637645 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robusta CS-951.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 155.0
  • Bit_score: 141
  • Evalue 8.20e-31
def; peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 160.0
  • Bit_score: 132
  • Evalue 7.60e-29
Peptide deformylase n=1 Tax=Lyngbya aestuarii BL J RepID=U7QK39_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 155.0
  • Bit_score: 136
  • Evalue 1.40e-29

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Taxonomy

Limnoraphis robusta → Limnoraphis → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGATTCTTCCGCTTGTGCGCACAGACCACCCGGTATTGCGTCGAGGCGCGGACATGATTACGCGATTCGATGATCCGGCGCTGCAAAAATTGATAGATGACATGATCCCGACTATGTATGAGCGCGACGGTATCGGACTTGCTGCGCCACAAGTAAATTACTCTTTGCGTCTTGCGGTTATCGTACCGGATCCCGACCGCTACGAAGAATACAAGAAAGAAAGTCGTGAAGGTACGGTGTTAATCAACCCCAGAATCATTCGCCATTCATTCCGAAAAGAGGCGCATGAAGAGGGGTGTCTTTCCGTCCCCGGCATTTTTGGTCCTGTGAGACGATATATGTCAGTTACGGCGGAATACCAGGATAGAAATGGCCAAACGCACACGATAAAGGGCACAGGGCTGCTCGCGCGCGTGCTTCAGCACGAGACTGATCACCTCAATGGGACGTTATTTATAGACAAGTCCACCCGCCTTTATAAAGTGACTGCGCTTTGA
PROTEIN sequence
Length: 166
MILPLVRTDHPVLRRGADMITRFDDPALQKLIDDMIPTMYERDGIGLAAPQVNYSLRLAVIVPDPDRYEEYKKESREGTVLINPRIIRHSFRKEAHEEGCLSVPGIFGPVRRYMSVTAEYQDRNGQTHTIKGTGLLARVLQHETDHLNGTLFIDKSTRLYKVTAL*