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GD18-4_B1_scaffold_1183614

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_1183614_1

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2..4627
DNA (4626bp) protein (1542aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XQU8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKW43645.1}; TaxID=1618803 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_56_13.;"
hypothetical protein
GD18-4_B1_scaffold_1183614_2
unknown

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4635..7358
DNA (2724bp) protein (908aa)

This feature has no annotations

GD18-4_B1_scaffold_1183614_3
unknown

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7367..7972
DNA (606bp) protein (202aa)

This feature has no annotations

GD18-4_B1_scaffold_1183614_4
unknown

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7996..8304
DNA (309bp) protein (103aa)

This feature has no annotations

GD18-4_B1_scaffold_1183614_5

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8323..10560
DNA (2238bp) protein (746aa)
Cell surface protein; K07114 uncharacterized protein id=5046289 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46090.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Cell surface protein
GD18-4_B1_scaffold_1183614_6
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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10695..11561
DNA (867bp) protein (289aa)
Putative uncharacterized protein id=2178683 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
GD18-4_B1_scaffold_1183614_7

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11750..12178
DNA (429bp) protein (143aa)
MutT-like protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67JH1_SYMTH
NUDIX hydrolase {ECO:0000313|EMBL:KHO51197.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
MutT-like protein
GD18-4_B1_scaffold_1183614_8
CG_Falkow_04, Falkowbacteria, Parcubacteria, Bacteria

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12260..12649
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003788D72
hypothetical protein
Tax=CG_Falkow_04
GD18-4_B1_scaffold_1183614_9
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

12752..13447
DNA (696bp) protein (232aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
GD18-4_B1_scaffold_1183614_10
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(13477..13974)
DNA (498bp) protein (166aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1637645 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robusta CS-951.;"
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Lyngbya aestuarii BL J RepID=U7QK39_9CYAN
GD18-4_B1_scaffold_1183614_11
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(13971..15848)
DNA (1878bp) protein (626aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] id=5095495 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
primosomal protein N''
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
GD18-4_B1_scaffold_1183614_12
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(15861..16658)
DNA (798bp) protein (266aa)
Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B id=2076416 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
GD18-4_B1_scaffold_1183614_13
R_OD1_Uhrbacteria_48_12, Uhrbacteria, Parcubacteria, Bacteria

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comp(16655..18091)
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B6CCB6
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated
GD18-4_B1_scaffold_1183614_14
RBG_13_OD1_Falkowbacteria_39_9_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(18185..20830)
DNA (2646bp) protein (882aa)
protein disaggregation chaperone n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B3349C
ClpA; ATPase with chaperone activity, ATP-binding subunit
Tax=RBG_13_OD1_Falkowbacteria_39_9_curated
GD18-4_B1_scaffold_1183614_15
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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21275..22021
DNA (747bp) protein (249aa)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187)
Glycosyl transferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:ACZ39181.1}; EC=2.4.1.187 {ECO:0000313|EMBL:ACZ39181.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Glycosyl transferase, WecB/TagA/CpsF family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4L4_SPHTD
GD18-4_B1_scaffold_1183614_16
R_KAZAN_48_13, Kazan, Bacteria

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22018..22425
DNA (408bp) protein (136aa)
putative glycoprotease family alias= id=3327707 bin=GWC1_CPR2_39_9 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
peptidase M22 glycoprotease
Tax=RIFCSPLOWO2_01_FULL_KAZAN_48_13_curated
GD18-4_B1_scaffold_1183614_17
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

22422..23681
DNA (1260bp) protein (420aa)
AAA ATPase central domain protein n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7AQ49_THEM3
ATPase AAA {ECO:0000313|EMBL:KHO62921.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. YS13.;"
AAA ATPase central domain-containing protein
GD18-4_B1_scaffold_1183614_18
unknown

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24057..24179
DNA (123bp) protein (41aa)

This feature has no annotations

GD18-4_B1_scaffold_1183614_19
RIFOXYA2_FULL_RIF_OD1_01_38_24_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

24209..24640
DNA (432bp) protein (144aa)
Protein MraZ n=1 Tax=uncultured bacterium RepID=K2CYJ9_9BACT
protein mraZ
Tax=RIFOXYA2_FULL_RIF_OD1_01_38_24_curated
GD18-4_B1_scaffold_1183614_20
R_OP3X_51_18, OP3X, Bacteria

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24650..25537
DNA (888bp) protein (296aa)
16S rRNA methyltransferase n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B76B35
S-adenosyl-methyltransferase MraW
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
GD18-4_B1_scaffold_1183614_21
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

26153..27964
DNA (1812bp) protein (604aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase id=2178734 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
GD18-4_B1_scaffold_1183614_22
GWA2_OD1_40_10_partial, Magasanikbacteria, Parcubacteria, Bacteria

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27988..29286
DNA (1299bp) protein (433aa)
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase {ECO:0000313|EMBL:KKR35398.1}; TaxID=1619037 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_40_10.;"
Alanine racemase id=1930554 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
GD18-4_B1_scaffold_1183614_trna_1
unknown

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29292..29363
DNA (72bp)
transferRNA Glu
GD18-4_B1_scaffold_1183614_23
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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29392..30057
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A003_METMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF99971.1}; Flags: Precursor;; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
GD18-4_B1_scaffold_1183614_24
unknown

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comp(30292..30588)
DNA (297bp) protein (99aa)

This feature has no annotations

GD18-4_B1_scaffold_1183614_25
unknown

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comp(30539..30973)
DNA (435bp) protein (145aa)

This feature has no annotations

GD18-4_B1_scaffold_1183614_26
RIFOXYB2_FULL_OD1_Uhrbacteria_45_11_curated, Uhrbacteria, Parcubacteria, Bacteria

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31013..31918
DNA (906bp) protein (302aa)
transmembrane_regions 354..376 id=119995 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFOXYB2_FULL_OD1_Uhrbacteria_45_11_curated
GD18-4_B1_scaffold_1183614_27
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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31956..33359
DNA (1404bp) protein (468aa)
gnd; Gnd (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XE88_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
GD18-4_B1_scaffold_1183614_28
R_PER_ii_51_9, PER-ii, Bacteria

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33344..36043
DNA (2700bp) protein (900aa)
Subtilisin-like serine protease id=5091413 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
peptidase S8/S53 subtilisin kexin sedolisin
Tax=RIFCSPHIGHO2_01_FULL_PER_ii_51_9_curated
GD18-4_B1_scaffold_1183614_29
unknown

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36097..36579
DNA (483bp) protein (161aa)

This feature has no annotations

Displaying items 1-30 of 76 in total

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