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B_1_S1_Biohub_coassembly_k141_2451266

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_2451266_1
unknown

Not on your lists

1..546
DNA (546bp) protein (182aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2451266_2
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

Not on your lists

comp(538..924)
DNA (387bp) protein (129aa)
Nucleotidyltransferase substrate binding protein, HI0074 family bin=GWA2_Elusimicrobia_56_46 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
nucleotidyltransferase substrate binding protein
Tax=GWC2_Elusimicrobia_56_31_curated
B_1_S1_Biohub_coassembly_k141_2451266_3
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(921..1232)
DNA (312bp) protein (104aa)
DNA polymerase beta domain protein region bin=GWA2_Elusimicrobia_56_46 species=unknown genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
DNA polymerase beta domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
B_1_S1_Biohub_coassembly_k141_2451266_4
unknown

Not on your lists

1389..1811
DNA (423bp) protein (141aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2451266_5
R_RIF_OD1_13_53_17, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

1954..2238
DNA (285bp) protein (95aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_53_17_curated
B_1_S1_Biohub_coassembly_k141_2451266_6
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

2216..2833
DNA (618bp) protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT18765.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
Uncharacterized protein bin=GWA1_ZB2_49_26 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
B_1_S1_Biohub_coassembly_k141_2451266_7
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

2861..4147
DNA (1287bp) protein (429aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
B_1_S1_Biohub_coassembly_k141_2451266_8
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

4239..5402
DNA (1164bp) protein (388aa)
alr; alanine racemase (EC:5.1.1.1)
Alanine racemase bin=CD_OP8_4m species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
B_1_S1_Biohub_coassembly_k141_2451266_9
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

5488..6375
DNA (888bp) protein (296aa)
transmembrane_regions 21..40 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
B_1_S1_Biohub_coassembly_k141_2451266_10
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

comp(6429..8384)
DNA (1956bp) protein (652aa)
glycosyl transferase family protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
glycosyl transferase family protein
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
B_1_S1_Biohub_coassembly_k141_2451266_11
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

8453..10342
DNA (1890bp) protein (630aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1ZB76_9BACT
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
B_1_S1_Biohub_coassembly_k141_2451266_12
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

10398..12281
DNA (1884bp) protein (628aa)
nth:Nther_1179 GTP-binding protein LepA; K03596 GTP-binding protein LepA bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
GTP-binding protein LepA
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
B_1_S1_Biohub_coassembly_k141_2451266_13
R_OD1_Wolfebacteria_44_18, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

12355..12660
DNA (306bp) protein (102aa)
coiled-coil 35..63 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_44_18_curated
B_1_S1_Biohub_coassembly_k141_2451266_14
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists

12638..13216
DNA (579bp) protein (193aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW46199.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
B_1_S1_Biohub_coassembly_k141_2451266_15
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

13348..14013
DNA (666bp) protein (222aa)
L-isoaspartyl protein carboxyl methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
B_1_S1_Biohub_coassembly_k141_2451266_16
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

14059..14718
DNA (660bp) protein (220aa)
protein-l-isoaspartate o-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
protein-L-isoaspartate O-methyltransferase
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
B_1_S1_Biohub_coassembly_k141_2451266_trna_1
unknown

Not on your lists

14931..15001
DNA (71bp)
transferRNA Gly
B_1_S1_Biohub_coassembly_k141_2451266_17

Not on your lists

15257..15673
DNA (417bp) protein (139aa)
transmembrane_regions 4..26 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:EKD23769.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_2451266_18
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

15737..17461
DNA (1725bp) protein (575aa)
gmc:GY4MC1_1083 DNA primase; K02316 DNA primase [EC:2.7.7.-] bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
DNA primase (EC:2.7.7.-)
Primase protein {ECO:0000313|EMBL:KKW47298.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
B_1_S1_Biohub_coassembly_k141_2451266_19
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

17597..18799
DNA (1203bp) protein (401aa)
RNA polymerase sigma factor Tax=uncultured bacterium RepID=K1X0J6_9BACT
rpoD1; RNA polymerase sigma factor RpoD
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
B_1_S1_Biohub_coassembly_k141_2451266_20
RIFOXYC2_FULL_OD1_Magasanikbacteria_39_8_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

18806..19342
DNA (537bp) protein (179aa)
Tax=RIFOXYC2_FULL_OD1_Magasanikbacteria_39_8_curated
B_1_S1_Biohub_coassembly_k141_2451266_21
unknown

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19707..19814
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 22 items

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