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B_1_S1_Biohub_coassembly_k141_4046526

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_4046526_1
GWA2_OD1_49_9, Parcubacteria, Bacteria

Not on your lists

285..2600
DNA (2316bp) protein (772aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW10636.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_49_9.;"
B_1_S1_Biohub_coassembly_k141_4046526_2
unknown

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2824..3969
DNA (1146bp) protein (382aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4046526_trna_1
unknown

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4447..4517
DNA (71bp)
transferRNA Trp
B_1_S1_Biohub_coassembly_k141_4046526_3
R_OD1_Yanofskybacteria_41_34, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

4605..4850
DNA (246bp) protein (82aa)
Putative uncharacterized protein Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JKJ8_9BACT bin=ACD7 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
excinuclease ABC C subunit domain-containing protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_41_34_curated
B_1_S1_Biohub_coassembly_k141_4046526_4
R_OD1_Kaiserbacteria_56_24, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

4984..5649
DNA (666bp) protein (222aa)
hypothetical protein Tax=Pseudomonas geniculata RepID=UPI00029A248C
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_56_24_curated
B_1_S1_Biohub_coassembly_k141_4046526_5
R_OD1_Kaiserbacteria_56_24, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

5892..6341
DNA (450bp) protein (150aa)
hypothetical protein Tax=Nocardiopsis chromatogenes RepID=UPI00036B87D1
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_56_24_curated
B_1_S1_Biohub_coassembly_k141_4046526_6
R_OD1_Kaiserbacteria_55_17, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

6461..6859
DNA (399bp) protein (133aa)
Phosphoribosyltransferase bin=GWD2_CPR2_39_7 species=uncultured marine crenarchaeote E37-7F genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
phosphoribosyltransferase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_55_17_curated
B_1_S1_Biohub_coassembly_k141_4046526_7

Not on your lists

6878..7342
DNA (465bp) protein (155aa)
RNA pyrophosphohydrolase (EC:3.6.1.-)
NUDIX_BOX 42..63 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE11664.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
B_1_S1_Biohub_coassembly_k141_4046526_8
GWF2_OD1_43_8, Nomurabacteria, Parcubacteria, Bacteria

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7365..9176
DNA (1812bp) protein (604aa)
hypothetical protein Tax=Uliginosibacterium gangwonense RepID=UPI0003609E8A
Uncharacterized protein {ECO:0000313|EMBL:KKT25081.1}; Flags: Fragment;; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWF2_43_8.;"
ABC transporter family protein
B_1_S1_Biohub_coassembly_k141_4046526_9
R_RIF_OD1_12_45_13b, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

9182..9760
DNA (579bp) protein (193aa)
NUDIX hydrolase bin=GWD2_CPR2_39_7 species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
NUDIX hydrolase
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_45_13b_curated
B_1_S1_Biohub_coassembly_k141_4046526_10
GWA2_OD1_47_10, Parcubacteria, Bacteria

Not on your lists

9761..10213
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU52859.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10.;"
alias=gwe2_scaffold_1276_21 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
B_1_S1_Biohub_coassembly_k141_4046526_11
GWA2_OD1_42_15, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10488..12050)
DNA (1563bp) protein (521aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003700B6A
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000313|EMBL:KKS42479.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Kuenenbacteria) bacterium GW2011_GWA2_42_15.;"
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein
B_1_S1_Biohub_coassembly_k141_4046526_12
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists


12285..12809
DNA (525bp) protein (175aa)
50S ribosomal protein L10 Tax=Parvimonas micra ATCC 33270 RepID=A8SM48_9FIRM bin=ACD81 species=Parvimonas micra genus=Parvimonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
50S ribosomal protein L10
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
B_1_S1_Biohub_coassembly_k141_4046526_13
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists


12918..13283
DNA (366bp) protein (122aa)
50S ribosomal protein L7/L12 {ECO:0000313|EMBL:KKW48319.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
ribosomal protein L7/L12
B_1_S1_Biohub_coassembly_k141_4046526_trna_3
unknown

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comp(13355..13426)
DNA (72bp)
transferRNA Val
B_1_S1_Biohub_coassembly_k141_4046526_14
GWC2_OD1_48_17, Parcubacteria, Bacteria

Not on your lists

13572..14729
DNA (1158bp) protein (386aa)
Extracellular ligand-binding receptor {ECO:0000313|EMBL:KKU95942.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_48_17.;"
Branched chain amino acid ABC transporter bin=GWB2_Proteobacteria_55_19 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
ethanolamine utilization protein EutJ
B_1_S1_Biohub_coassembly_k141_4046526_15
Parcubacteria bacterium GW2011_GWC2_45_7, Parcubacteria, Bacteria

Not on your lists

14888..15757
DNA (870bp) protein (290aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU13100.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_7.;"
Putative High-affinity branched-chain amino acid transport system permease protein bin=GWC2_Deltaproteobacteria_56_8 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
ABC transporter permease
B_1_S1_Biohub_coassembly_k141_4046526_16
GWE2_OD1_42_7, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

15811..16692
DNA (882bp) protein (294aa)
Inner-membrane translocator {ECO:0000313|EMBL:KKS70220.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWE2_42_7.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
branched-chain amino acid ABC transporter permease
B_1_S1_Biohub_coassembly_k141_4046526_17
Parcubacteria bacterium GW2011_GWC2_45_7, Parcubacteria, Bacteria

Not on your lists

16824..17555
DNA (732bp) protein (244aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:KKU13102.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_7.;"
ABC transporter-like protein bin=OD1_GWC2_34_28 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ABC transporter-like protein
B_1_S1_Biohub_coassembly_k141_4046526_18
unknown

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comp(17456..17680)
DNA (225bp) protein (75aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4046526_19
GWE2_OD1_42_7, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

17728..18477
DNA (750bp) protein (250aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30); K01996 branched-chain amino acid transport system ATP-binding protein bin=OD1_GWC2_34_28 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Fe(3+)-transporting ATPase (EC:3.6.3.30)
Fe(3+)-transporting ATPase {ECO:0000313|EMBL:KKS70218.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWE2_42_7.;"
B_1_S1_Biohub_coassembly_k141_4046526_20
R_OD1_Yanofskybacteria_49_25, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

18482..19171
DNA (690bp) protein (230aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360FDDC
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_49_25_curated
B_1_S1_Biohub_coassembly_k141_4046526_21
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

19453..19884
DNA (432bp) protein (144aa)
Protein MraZ Tax=uncultured bacterium RepID=K1XU95_9BACT
MraZ protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
B_1_S1_Biohub_coassembly_k141_4046526_22
R_OD1_57_28, Parcubacteria, Bacteria

Not on your lists

19953..20834
DNA (882bp) protein (294aa)
mraW; S-adenosyl-methyltransferase MraW; K03438 S-adenosyl-methyltransferase [EC:2.1.1.-] bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
mraW; S-adenosyl-methyltransferase MraW
Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
B_1_S1_Biohub_coassembly_k141_4046526_23
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

20891..21208
DNA (318bp) protein (106aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW48304.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
B_1_S1_Biohub_coassembly_k141_4046526_24
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

21184..22851
DNA (1668bp) protein (556aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
B_1_S1_Biohub_coassembly_k141_4046526_25
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

22911..24173
DNA (1263bp) protein (421aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase [EC:6.3.2.10] bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
B_1_S1_Biohub_coassembly_k141_4046526_26
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(24185..24961)
DNA (777bp) protein (259aa)
Tax=RBG_16_Ignavibacteria_35_7_curated
B_1_S1_Biohub_coassembly_k141_4046526_trna_2
unknown

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comp(24983..25054)
DNA (72bp)
transferRNA Glu
B_1_S1_Biohub_coassembly_k141_4046526_27
unknown

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25263..25433
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying items 1-30 of 88 in total

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