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S_p1_S3_coassembly_k141_671689

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_671689_1
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(2..1198)
DNA (1197bp) protein (399aa)
Putative uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_671689_2
R_OD1_Yanofskybacteria_42_49, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(1303..1722)
DNA (420bp) protein (140aa)
id=2192937 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_42_49_curated
S_p1_S3_coassembly_k141_671689_3
R_OD1_Yanofskybacteria_41_34, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(1967..2407)
DNA (441bp) protein (147aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_41_34_curated
S_p1_S3_coassembly_k141_671689_4
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(2564..4903)
DNA (2340bp) protein (780aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_671689_5
R_OD1_Yanofskybacteria_43_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

5023..6057
DNA (1035bp) protein (345aa)
Putative uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_43_22_curated
S_p1_S3_coassembly_k141_671689_6
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

6103..7980
DNA (1878bp) protein (626aa)
Glycosyl transferase family 39 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
glycosyl transferase family protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_671689_7
R_OD1_Yanofskybacteria_43_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(9447..9662)
DNA (216bp) protein (72aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_43_22_curated
S_p1_S3_coassembly_k141_671689_8
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(9810..10799)
DNA (990bp) protein (330aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
hypothetical protein Tax=Balneola vulgaris RepID=UPI00036672FF
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_671689_9
R_OD1_Yanofskybacteria_43_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(10964..11770)
DNA (807bp) protein (269aa)
id=1947683 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_43_22_curated
S_p1_S3_coassembly_k141_671689_10

Not on your lists

comp(11767..12342)
DNA (576bp) protein (192aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55976.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_34_10.;"
S_p1_S3_coassembly_k141_671689_11
R_OD1_Yanofskybacteria_42_49, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(12555..12944)
DNA (390bp) protein (130aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035C3635
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_42_49_curated
S_p1_S3_coassembly_k141_671689_12
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(12960..14243)
DNA (1284bp) protein (428aa)
hypothetical protein Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI00036F9116
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_671689_13
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(14422..15873)
DNA (1452bp) protein (484aa)
lysyl-tRNA synthetase (EC:6.1.1.6)
lysyl-tRNA synthetase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_671689_14
R_RIF_OD1_13_47_10, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

15953..16609
DNA (657bp) protein (219aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
deoxyuridine 5''''-triphosphate nucleotidohydrolase Tax=Leptolyngbya boryana RepID=UPI00035C7D7F
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_47_10_curated
S_p1_S3_coassembly_k141_671689_15
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(16636..17091)
DNA (456bp) protein (152aa)
transcription elongation factor GreA bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_671689_16
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(17265..19112)
DNA (1848bp) protein (616aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein 2 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_671689_17
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(19203..19775)
DNA (573bp) protein (191aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_671689_18
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(19836..20630)
DNA (795bp) protein (265aa)
Cell shape-determining protein MreC bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
rod shape-determining protein MreC
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_671689_19
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(20770..21819)
DNA (1050bp) protein (350aa)
Cell shape determining protein, MreB/Mrl family bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
mreB; Rod shape-determining protein MreB
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_671689_20
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


comp(21870..23165)
DNA (1296bp) protein (432aa)
Prolyl-tRNA synthetase bin=GWC2_OD1_43_27 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Prolyl-tRNA synthetase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_671689_21
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(23367..24425)
DNA (1059bp) protein (353aa)
Membrane-associated zinc metalloprotease bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
membrane-associated zinc metalloprotease
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
Displaying 21 items

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