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S_p1_S3_coassembly_k141_1260416

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1260416_1
R_OP11_Daviesbacteria_39_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(124..759)
DNA (636bp) protein (212aa)
hypothetical protein bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_39_12_curated
S_p1_S3_coassembly_k141_1260416_2
unknown

Not on your lists

1070..1636
DNA (567bp) protein (189aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1260416_3

Not on your lists

comp(1649..3223)
DNA (1575bp) protein (525aa)
Marine sediment metagenome DNA, contig: S12H4_L02178 {ECO:0000313|EMBL:GAI81095.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_1260416_4
unknown

Not on your lists

3326..3853
DNA (528bp) protein (176aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1260416_5
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(3876..4685)
DNA (810bp) protein (270aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Methionyl-tRNA formyltransferase {ECO:0000313|EMBL:KKQ09090.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
methionyl-tRNA formyltransferase
S_p1_S3_coassembly_k141_1260416_6
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(4682..5203)
DNA (522bp) protein (174aa)
Peptide deformylase Tax=uncultured bacterium RepID=K2CGP3_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1260416_7
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(5220..5477)
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CGM0_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1260416_8
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(5474..7414)
DNA (1941bp) protein (647aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CZY3_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1260416_9
R_OP11_Daviesbacteria_38_18, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

7605..8669
DNA (1065bp) protein (355aa)
tro:trd_1938 rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
rod shape-determining protein MreB
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_38_18_curated
S_p1_S3_coassembly_k141_1260416_10
R_OP11_Daviesbacteria_36_13, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

8666..9298
DNA (633bp) protein (211aa)
ppaX; pyrophosphatase PpaX (EC:3.6.1.1); K06019 pyrophosphatase PpaX [EC:3.6.1.1] bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
pyrophosphatase PpaX (EC:3.6.1.1)
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_36_13_curated
S_p1_S3_coassembly_k141_1260416_11
GWC2_OP11_40_7_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists

9372..9617
DNA (246bp) protein (82aa)
AbrB/MazE/MraZ-like bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKR73324.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWC2_40_7.;"
S_p1_S3_coassembly_k141_1260416_12
GWC2_OP11_40_7_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists

9614..10015
DNA (402bp) protein (134aa)
Death-on-curing family protein Tax=NC10 bacterium 'Dutch sediment' RepID=D5MKV9_9BACT bin=ACD37 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
Death-on-curing family protein {ECO:0000313|EMBL:KKR73325.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWC2_40_7.;"
death-on-curing family protein
S_p1_S3_coassembly_k141_1260416_13
R_OP11_Levybacteria_36_8b, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(10156..12738)
DNA (2583bp) protein (861aa)
id=5084877 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
adhesion or S-layer protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Levybacteria_36_8b_curated
S_p1_S3_coassembly_k141_1260416_14
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

12775..13848
DNA (1074bp) protein (358aa)
blb:BBMN68_1523 pyrD3; PyrD3 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Dihydroorotate oxidase {ECO:0000313|EMBL:KKQ75814.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_5b.;"
dihydroorotate oxidase
S_p1_S3_coassembly_k141_1260416_15
unknown

Not on your lists

comp(13991..14227)
DNA (237bp) protein (79aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1260416_16
R_OP11_Daviesbacteria_36_13, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(14220..15293)
DNA (1074bp) protein (358aa)
CAD protein Tax=uncultured bacterium RepID=K2CX46_9BACT
pyrC; dihydroorotase
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_36_13_curated
S_p1_S3_coassembly_k141_1260416_17
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(15290..16021)
DNA (732bp) protein (244aa)
dgr:Dgri_GH12789 GH12789 gene product from transcript GH12789-RA ; K11540 carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:6.3.5.5 2.1.3.2 3.5.2.3] bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
uridine monophosphate synthetase (EC:4.1.1.23 2.4.2.10)
Uncharacterized protein {ECO:0000313|EMBL:KKQ16134.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_36_8.;"
S_p1_S3_coassembly_k141_1260416_18

Not on your lists

comp(16014..16814)
DNA (801bp) protein (267aa)
pyrF; orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Orotidine 5'-phosphate decarboxylase {ECO:0000256|RuleBase:RU000512, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|RuleBase:RU000512, ECO:0000256|SAAS:SAAS00032220};; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
orotidine 5'-phosphate decarboxylase
S_p1_S3_coassembly_k141_1260416_19
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

16900..17622
DNA (723bp) protein (241aa)
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Rod shape-determining protein MreC {ECO:0000313|EMBL:KKQ75805.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_5b.;"
mreC; rod shape-determining protein MreC
S_p1_S3_coassembly_k141_1260416_20
R_OP11_Daviesbacteria_39_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

17619..18074
DNA (456bp) protein (152aa)
transmembrane_regions 7..29 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_39_12_curated
S_p1_S3_coassembly_k141_1260416_21
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

18078..19919
DNA (1842bp) protein (614aa)
penicillin-binding protein 2 (EC:2.4.1.129)
tel:tll1183 penicillin-binding protein 2; K05515 penicillin-binding protein 2 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1260416_22
RifOxyA12_full_OD1_Moranbacteria_35_19_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

20341..21072
DNA (732bp) protein (244aa)
Tax=RifOxyA12_full_OD1_Moranbacteria_35_19_curated
S_p1_S3_coassembly_k141_1260416_23
RHI_OP11_Levybacteria_38_12, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(21635..21955)
DNA (321bp) protein (107aa)
Tax=RIFCSPHIGHO2_12_FULL_OP11_Levybacteria_38_12_curated
S_p1_S3_coassembly_k141_1260416_24
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(21995..22324)
DNA (330bp) protein (110aa)
hypothetical protein bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_36_15_curated
S_p1_S3_coassembly_k141_1260416_25
Microgenomates bacterium GW2011_GWC1_41_20, Microgenomates, Bacteria

Not on your lists

22451..23119
DNA (669bp) protein (223aa)
seg 9..22 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKR99438.1}; species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_41_20.;"
S_p1_S3_coassembly_k141_1260416_26
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

23233..24312
DNA (1080bp) protein (360aa)
DNA protecting protein DprA; K04096 DNA processing protein bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
DNA protecting protein DprA
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1260416_27
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

24671..27178
DNA (2508bp) protein (836aa)
ATPase with chaperone activity, ATP-binding subunit {ECO:0000313|EMBL:KKQ75800.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_5b.;"
taf:THA_686 negative regulator of genetic competence ClpC/MecB; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
S_p1_S3_coassembly_k141_1260416_28
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

27188..27550
DNA (363bp) protein (121aa)
coiled-coil 37..58 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1260416_29
RHI_OP11_Daviesbacteria_37_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

27547..27810
DNA (264bp) protein (88aa)
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_11_curated
S_p1_S3_coassembly_k141_1260416_30
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

27854..29878
DNA (2025bp) protein (675aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase (Fragment) Tax=uncultured bacterium RepID=K2CW40_9BACT
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
Displaying items 1-30 of 48 in total

View Taxonomy