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S_p1_S3_coassembly_k141_2018894

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2018894_16S_1
unknown

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comp(2..602)
DNA (601bp)
16S ribosomal RNA (16S rRNA)
S_p1_S3_coassembly_k141_2018894_1
R_OD1_Wolfebacteria_47_17b, Wolfebacteria, Parcubacteria, Bacteria

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comp(640..1029)
DNA (390bp) protein (130aa)
Putative uncharacterized protein Tax=uncultured candidate division JS1 bacterium RepID=G3BML0_9BACT
S23 ribosomal
Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_47_17b_curated
S_p1_S3_coassembly_k141_2018894_2
unknown

Not on your lists

comp(1300..1509)
DNA (210bp) protein (70aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2018894_3
unknown

Not on your lists

comp(1731..2027)
DNA (297bp) protein (99aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2018894_4

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comp(2032..2379)
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU76301.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_64.;"
Putative uncharacterized protein (Fragment) bin=GWA2_CPR4_42_17 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
S_p1_S3_coassembly_k141_2018894_5
GWA1_OD1_51_14_curated, Parcubacteria, Bacteria

Not on your lists

comp(2384..3289)
DNA (906bp) protein (302aa)
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF bin=OD1_GWC2_34_28 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
protein-export membrane protein SecF
Tax=GWA1_OD1_51_14_curated
S_p1_S3_coassembly_k141_2018894_6
GWA1_OD1_51_14_curated, Parcubacteria, Bacteria

Not on your lists

comp(3292..4647)
DNA (1356bp) protein (452aa)
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
protein-export membrane protein SecD
Tax=GWA1_OD1_51_14_curated
S_p1_S3_coassembly_k141_2018894_7
GWA2_CPR1_42_17, CPR1, Bacteria

Not on your lists

comp(4841..5089)
DNA (249bp) protein (83aa)
Putative uncharacterized protein (Fragment) bin=GWA2_CPR4_42_17 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
Uncharacterized protein {ECO:0000313|EMBL:KKS43747.1}; species="Bacteria; candidate division CPR1.;" source="candidate division CPR1 bacterium GW2011_GWA2_42_17.;"
S_p1_S3_coassembly_k141_2018894_8
RIFOXYD2_FULL_OD1_52_8_curated, Parcubacteria, Bacteria

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5188..5421
DNA (234bp) protein (78aa)
transmembrane_regions 13..35 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
secG; preprotein translocase subunit SecG
Tax=RIFOXYD2_FULL_OD1_52_8_curated
S_p1_S3_coassembly_k141_2018894_9
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

5486..7153
DNA (1668bp) protein (556aa)
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
putative periplasmic oligopeptide-binding protein of oligopeptide ABC transporter
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
S_p1_S3_coassembly_k141_2018894_10
GWA2_OD1_53_7_partial, Giovannonibacteria, Parcubacteria, Bacteria

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7173..8891
DNA (1719bp) protein (573aa)
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:KKW34487.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_53_7.;"
RNA-metabolising metallo-beta-lactamase bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
beta-lactamase domain protein
S_p1_S3_coassembly_k141_2018894_11
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

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9087..10220
DNA (1134bp) protein (378aa)
Major facilitator superfamily {ECO:0000313|EMBL:KKW11612.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
Major facilitator superfamily MFS_1 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
transporter
S_p1_S3_coassembly_k141_2018894_12
R_OD1_Yanofskybacteria_49_25, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(10221..13088)
DNA (2868bp) protein (956aa)
UvrD/REP helicase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
DNA helicase UvrD
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_49_25_curated
S_p1_S3_coassembly_k141_2018894_13
unknown

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comp(13189..13377)
DNA (189bp) protein (63aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2018894_14
unknown

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comp(13469..13612)
DNA (144bp) protein (48aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2018894_15
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

13805..14020
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS72745.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
Putative uncharacterized protein bin=GWC2_OD1_43_27 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
putative protein family UPF0150
S_p1_S3_coassembly_k141_2018894_16
R_RIF_OD1_06_34_10, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

14020..14214
DNA (195bp) protein (65aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2A6L7_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_34_10_curated
S_p1_S3_coassembly_k141_2018894_17
R_RIF_OD1_11_46_22b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

14299..14712
DNA (414bp) protein (138aa)
GatB/YqeY domain-containing protein; K09117 hypothetical protein bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_46_22b_curated
S_p1_S3_coassembly_k141_2018894_18
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(14709..15371)
DNA (663bp) protein (221aa)
Protein-L-isoaspartate(D-aspartate)O-methyltrans ferase (EC:2.1.1.77)
Uncharacterized protein Tax=uncultured bacterium RepID=K2FB80_9BACT
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:KKT21304.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
S_p1_S3_coassembly_k141_2018894_19
RLO_OD1_41_13, Parcubacteria, Bacteria

Not on your lists

comp(15472..16290)
DNA (819bp) protein (273aa)
Uncharacterized protein bin=GWA1_ZB2_49_26 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Periplasmic immunogenic protein
Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated
S_p1_S3_coassembly_k141_2018894_20
unknown

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comp(16362..16553)
DNA (192bp) protein (64aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2018894_21
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(16603..18624)
DNA (2022bp) protein (674aa)
Peptidase S9A prolyl oligopeptidase domain protein beta-propeller Tax=Caldithrix abyssi DSM 13497 RepID=H1XPJ5_9BACT
ptrB; protease II
Tax=RBG_16_Zixibacteria_50_21_curated
S_p1_S3_coassembly_k141_2018894_22
GWF2_OD1_34_56, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(19352..20284)
DNA (933bp) protein (311aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP65023.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_34_56.;"
S_p1_S3_coassembly_k141_2018894_23
R_OP11_Levybacteria_37_33, Levybacteria, Microgenomates, Bacteria

Not on your lists

20335..20853
DNA (519bp) protein (173aa)
BstYI methyltransferase bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_37_33_curated
Displaying 24 items

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