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S_p1_S3_coassembly_k141_2117244

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2117244_1
R_RIF_OD1_07_49_22b, RIF-OD1-7, Parcubacteria, Bacteria

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33..428
DNA (396bp) protein (132aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000363800B
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_49_22b_curated
S_p1_S3_coassembly_k141_2117244_2
unknown

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comp(630..947)
DNA (318bp) protein (106aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2117244_3
unknown

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comp(934..1434)
DNA (501bp) protein (167aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2117244_4
R_RIF_OD1_12_45_17b, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(1431..1982)
DNA (552bp) protein (184aa)
seg bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_45_17b_curated
S_p1_S3_coassembly_k141_2117244_5
R_OD1_Jorgensenbacteria_45_25b, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1975..3072)
DNA (1098bp) protein (366aa)
Type IV pilus assembly protein PilM Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PX91_9BACT
pilM; type IV pilus assembly protein PilM
Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
S_p1_S3_coassembly_k141_2117244_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(3072..3674)
DNA (603bp) protein (201aa)
hypothetical protein; K03975 membrane-associated protein bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
S_p1_S3_coassembly_k141_2117244_7

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comp(3671..4084)
DNA (414bp) protein (138aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] bin=OD1_GWC2_34_28 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKU68182.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_16.;"
Holliday junction resolvase-like protein
S_p1_S3_coassembly_k141_2117244_trna_1
unknown

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4306..4392
DNA (87bp)
transferRNA Ser
S_p1_S3_coassembly_k141_2117244_8
R_OD1_44_24, Parcubacteria, Bacteria

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4439..5056
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CNE6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_44_24_curated
S_p1_S3_coassembly_k141_2117244_9
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

5108..5554
DNA (447bp) protein (149aa)
Putative uncharacterized protein bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
S_p1_S3_coassembly_k141_2117244_trna_2
unknown

Not on your lists

5885..5956
DNA (72bp)
transferRNA Arg
S_p1_S3_coassembly_k141_2117244_10
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


comp(5960..6226)
DNA (267bp) protein (89aa)
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S20
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
S_p1_S3_coassembly_k141_2117244_11
R_OD1_Giovannonibacteria_46_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(6234..6434)
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_32_curated
S_p1_S3_coassembly_k141_2117244_12
R_RIF_OD1_10_47_33, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

6814..7428
DNA (615bp) protein (205aa)
Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Holliday junction DNA helicase, RuvA subunit
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_10_47_33_curated
S_p1_S3_coassembly_k141_2117244_13
GWC2_OP11_47_9_partial, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

7435..8661
DNA (1227bp) protein (409aa)
UDP-N-acetylmuramyl-tripeptide synthetase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] bin=OD1_GWC2_34_28 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase {ECO:0000313|EMBL:KKU87543.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWC2_47_9.;"
UDP-N-acetylmuramyl-tripeptide synthetase
S_p1_S3_coassembly_k141_2117244_14
GWA1_OD1_42_19_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(8647..8898)
DNA (252bp) protein (84aa)
hypothetical protein, partial Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00038014CF
Retron-type reverse transcriptase {ECO:0000313|EMBL:KKS45691.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWA1_42_19.;"
RNA-directed DNA polymerase
Displaying 16 items

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