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S_p2_S4_coassembly_k141_1678414

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_1678414_1
unknown

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2..499
DNA (498bp) protein (166aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1678414_2
CG_Berkel_02, Berkelbacteria, Bacteria

Not on your lists

587..1369
DNA (783bp) protein (261aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI0003664F44
Tax=CG_Berkel_02
S_p2_S4_coassembly_k141_1678414_3

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1382..2323
DNA (942bp) protein (314aa)
dihydroorotate oxidase (EC:1.3.3.1)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037DDE50
Dihydroorotate oxidase B, catalytic subunit {ECO:0000313|EMBL:KKS34710.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_13.;"
S_p2_S4_coassembly_k141_1678414_4
R_OD1_Kaiserbacteria_55_17, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

2342..2980
DNA (639bp) protein (213aa)
Orotate phosphoribosyltransferase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THI8_9CHLR
phosphoribosyltransferase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_55_17_curated
S_p2_S4_coassembly_k141_1678414_5
unknown

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3115..3423
DNA (309bp) protein (103aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1678414_trna_1
unknown

Not on your lists

3561..3634
DNA (74bp)
transferRNA Val
S_p2_S4_coassembly_k141_1678414_6
GWF2_OD1_45_11, Parcubacteria, Bacteria

Not on your lists

3702..3965
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT93783.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_45_11.;"
transmembrane_regions 5..27 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
S_p2_S4_coassembly_k141_1678414_trna_2
unknown

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4001..4072
DNA (72bp)
transferRNA Ala
S_p2_S4_coassembly_k141_1678414_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4232..11260)
DNA (7029bp) protein (2343aa)
YD repeat (Two copies) Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCX0_9FIRM
YD repeat (Two copies) {ECO:0000313|EMBL:EHO33539.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
YD repeat-containing protein
S_p2_S4_coassembly_k141_1678414_8

Not on your lists

comp(11904..13151)
DNA (1248bp) protein (416aa)
O-antigen polymerase {ECO:0000313|EMBL:KKR09649.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_39_18.;"
O-antigen polymerase bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
S_p2_S4_coassembly_k141_1678414_9

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comp(13148..14527)
DNA (1380bp) protein (460aa)
O-antigen polymerase Tax=uncultured bacterium RepID=K2BLQ5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR09648.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_39_18.;"
O-antigen polymerase
S_p2_S4_coassembly_k141_1678414_10
GWA2_CPR1_42_17, CPR1, Bacteria

Not on your lists

comp(14565..15635)
DNA (1071bp) protein (357aa)
Glycosyl transferase group 1 bin=GWA2_CPR4_42_17 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
Glycosyl transferase group 1 {ECO:0000313|EMBL:KKS43577.1}; species="Bacteria; candidate division CPR1.;" source="candidate division CPR1 bacterium GW2011_GWA2_42_17.;"
group 1 glycosyl transferase
S_p2_S4_coassembly_k141_1678414_11
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

comp(15635..17050)
DNA (1416bp) protein (472aa)
Heteropolysaccharide repeat unit export protein {ECO:0000313|EMBL:KKW00746.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
Polysaccharide biosynthesis protein, MviN-like family bin=GWA2_CPR4_42_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
polysaccharide biosynthesis protein
S_p2_S4_coassembly_k141_1678414_12
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

17264..19138
DNA (1875bp) protein (625aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CNW7_9BACT
Curculin domain protein (Mannose-binding) lectin {ECO:0000313|EMBL:KKW15583.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
S_p2_S4_coassembly_k141_1678414_13
RIFOXYA2_FULL_RIF_OD1_01_38_24_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(19122..19712)
DNA (591bp) protein (197aa)
transmembrane_regions 30..52 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Tax=RIFOXYA2_FULL_RIF_OD1_01_38_24_curated
S_p2_S4_coassembly_k141_1678414_14
R_RIF_OD1_01_42_19, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(19712..19966)
DNA (255bp) protein (85aa)
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_01_42_19_curated
S_p2_S4_coassembly_k141_1678414_15
R_OD1_Falkowbacteria_39_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(19966..20991)
DNA (1026bp) protein (342aa)
Holliday junction ATP-dependent DNA helicase RuvB Tax=Thermincola potens (strain JR) RepID=D5XEH5_THEPJ
Holliday junction DNA helicase RuvB
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_13_curated
S_p2_S4_coassembly_k141_1678414_16
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

comp(21269..23041)
DNA (1773bp) protein (591aa)
hypothetical protein Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI00036C1F0D
Uncharacterized protein {ECO:0000313|EMBL:KKW00762.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
hypothetical protein
S_p2_S4_coassembly_k141_1678414_17

Not on your lists

comp(23104..23622)
DNA (519bp) protein (173aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI0003745BDD
Protein containing Heat shock protein Hsp20 protein {ECO:0000313|EMBL:KKT07456.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_17.;"
Small heat shock protein
S_p2_S4_coassembly_k141_1678414_trna_3
unknown

Not on your lists

24212..24286
DNA (75bp)
transferRNA Glu
S_p2_S4_coassembly_k141_1678414_18
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(24452..24652)
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CFM6_9BACT
Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
S_p2_S4_coassembly_k141_1678414_19
unknown

Not on your lists

24993..25436
DNA (444bp) protein (148aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1678414_20
R_OD1_Uhrbacteria_47_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(25508..26311)
DNA (804bp) protein (268aa)
Transcriptional regulator, TrmB Tax=Burkholderia sp. Ch1-1 RepID=D5NS62_9BURK bin=ACD81 species=Burkholderia sp. Ch1-1 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
transcriptional regulator TrmB
Tax=RIFCSPLOWO2_01_FULL_OD1_Uhrbacteria_47_25_curated
S_p2_S4_coassembly_k141_1678414_21
unknown

Not on your lists

26439..27032
DNA (594bp) protein (198aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1678414_22
unknown

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27147..27677
DNA (531bp) protein (177aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1678414_23
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27748..29247
DNA (1500bp) protein (500aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3T9_GEODF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM19582.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S_p2_S4_coassembly_k141_1678414_24
unknown

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comp(29394..29957)
DNA (564bp) protein (188aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1678414_25
R_OD1_Falkowbacteria_46_11b, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


29995..31029
DNA (1035bp) protein (345aa)
gcp; putative DNA-binding/iron metalloprotein/AP endonuclease; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
Tax=RIFCSPLOWO2_02_FULL_OD1_Falkowbacteria_46_11b_curated
S_p2_S4_coassembly_k141_1678414_26
unknown

Not on your lists

comp(31097..31678)
DNA (582bp) protein (194aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1678414_27
unknown

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comp(31715..32953)
DNA (1239bp) protein (413aa)

This feature has no annotations

Displaying items 1-30 of 69 in total

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