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S_p2_S4_coassembly_k141_1963350

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_1963350_1
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

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comp(1..834)
DNA (834bp) protein (278aa)
DNA polymerase IV bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
nucleotidyltransferase/DNA polymerase involved in DNA repair
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
S_p2_S4_coassembly_k141_1963350_2
unknown

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1186..1524
DNA (339bp) protein (113aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1963350_3
unknown

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1619..1762
DNA (144bp) protein (48aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1963350_4
unknown

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1881..2216
DNA (336bp) protein (112aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1963350_5
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(2402..2650)
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2E6I4_9BACT
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
S_p2_S4_coassembly_k141_1963350_6
R_RIF_OD1_07_48_16, RIF-OD1-7, Parcubacteria, Bacteria

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3175..3570
DNA (396bp) protein (132aa)
Uncharacterized protein Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B6P6_FRADG bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_48_16_curated
S_p2_S4_coassembly_k141_1963350_7
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

3671..4294
DNA (624bp) protein (208aa)
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor Tax=uncultured bacterium RepID=K2BWK6_9BACT
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
S_p2_S4_coassembly_k141_1963350_8
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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4449..5063
DNA (615bp) protein (205aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
hypothetical protein Tax=Streptomyces sp. CNY243 RepID=UPI000364556B
Tax=RBG_13_Chloroflexi_56_8b_curated
S_p2_S4_coassembly_k141_1963350_9
RHI_SM2F11_42_22, SM2F11, Bacteria

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comp(5018..5962)
DNA (945bp) protein (315aa)
Putative uncharacterized protein bin=GWA1_Deltaproteobacteria_52_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
DMT(drug/metabolite transporter) superfamily permease
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
S_p2_S4_coassembly_k141_1963350_10
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(5990..6586)
DNA (597bp) protein (199aa)
Putative transcriptional regulator Tax=uncultured bacterium RepID=K1Y7X0_9BACT
Polymerase subunit beta protein {ECO:0000313|EMBL:KKW15234.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
nucleotidyltransferase domain-containing protein
S_p2_S4_coassembly_k141_1963350_11
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

6640..8886
DNA (2247bp) protein (749aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2BFY0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKW15233.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
S_p2_S4_coassembly_k141_1963350_12
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

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comp(8982..9440)
DNA (459bp) protein (153aa)
50S ribosomal protein L7/L12 Tax=Clostridiales RepID=D5HE43_9FIRM bin=ACD41 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
50S ribosomal protein L7/L12
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
S_p2_S4_coassembly_k141_1963350_13
GWE2_OD1_42_7, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists


comp(9481..10020)
DNA (540bp) protein (180aa)
50S ribosomal protein L10 Tax=uncultured bacterium RepID=K2EAV7_9BACT
50S ribosomal protein L10 {ECO:0000313|EMBL:KKS70552.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWE2_42_7.;"
rplJ; 50S ribosomal protein L10
S_p2_S4_coassembly_k141_1963350_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10383..11093
DNA (711bp) protein (237aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD54039.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
S_p2_S4_coassembly_k141_1963350_15
unknown

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comp(11171..11320)
DNA (150bp) protein (50aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1963350_16
unknown

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comp(11317..11571)
DNA (255bp) protein (85aa)

This feature has no annotations

Displaying 16 items

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