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S_p2_S4_coassembly_k141_3389324

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_3389324_1
unknown

Not on your lists

comp(1..81)
DNA (81bp) protein (27aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3389324_2
Clostridium sp. CAG:567, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(196..531)
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Clostridium sp. CAG:567 RepID=R7M9E1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDE97001.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:567.;"
S_p2_S4_coassembly_k141_3389324_trna_2
unknown

Not on your lists

comp(760..831)
DNA (72bp)
transferRNA Arg
S_p2_S4_coassembly_k141_3389324_3
R_OD1_Jorgensenbacteria_45_25b, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(942..1643)
DNA (702bp) protein (234aa)
glmU; glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157 2.7.7.23); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
nucleotidyltransferase
Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
S_p2_S4_coassembly_k141_3389324_4
GWF2_OD1_45_11, Parcubacteria, Bacteria

Not on your lists

comp(1640..2641)
DNA (1002bp) protein (334aa)
Methicillin resistance protein {ECO:0000313|EMBL:KKT92989.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_45_11.;"
hypothetical protein bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
methicillin resistance protein
S_p2_S4_coassembly_k141_3389324_5
R_OD1_Giovannonibacteria_46_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(2638..3192)
DNA (555bp) protein (185aa)
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
Holliday junction DNA helicase RuvA
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_32_curated
S_p2_S4_coassembly_k141_3389324_6
RHI_RIF_OD1_01_48_17, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(3221..4975)
DNA (1755bp) protein (585aa)
peptidase S8 and S53, subtilisin, kexin, sedolisin bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
FG-GAP repeat-containing protein
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_01_48_17_curated
S_p2_S4_coassembly_k141_3389324_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

5217..7259
DNA (2043bp) protein (681aa)
UvrABC system protein B Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1W6_SPHTD
excinuclease ABC subunit B
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
S_p2_S4_coassembly_k141_3389324_8
unknown

Not on your lists

comp(7330..7749)
DNA (420bp) protein (140aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3389324_9
R_SM2F11_46_24, SM2F11, Bacteria

Not on your lists

7897..8235
DNA (339bp) protein (113aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YFK6_9BACT
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated
S_p2_S4_coassembly_k141_3389324_10
R_OD1_Uhrbacteria_49_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

8232..8675
DNA (444bp) protein (148aa)
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
FAD synthetase
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_49_11_curated
S_p2_S4_coassembly_k141_3389324_11

Not on your lists


8727..8990
DNA (264bp) protein (88aa)
30S ribosomal protein S20 {ECO:0000313|EMBL:KKT49482.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_17.;"
30S ribosomal protein S20 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
rpsT; 30S ribosomal protein S20
S_p2_S4_coassembly_k141_3389324_12
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(9076..10065)
DNA (990bp) protein (330aa)
DNA polymerase III, delta subunit; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
DNA polymerase III subunit delta
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
S_p2_S4_coassembly_k141_3389324_13
unknown

Not on your lists

10244..10477
DNA (234bp) protein (78aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3389324_14
unknown

Not on your lists

10509..10793
DNA (285bp) protein (95aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3389324_15
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(11026..13776)
DNA (2751bp) protein (917aa)
DNA polymerase I (EC:2.7.7.7)
Polymerase I protein {ECO:0000313|EMBL:KKW16275.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
S_p2_S4_coassembly_k141_3389324_16
R_Planctomycetes_38_41, Planctomycetes, Bacteria

Not on your lists

comp(13832..14194)
DNA (363bp) protein (121aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_49_21 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
S23 ribosomal protein
Tax=RIFCSPHIGHO2_02_FULL_Planctomycetes_38_41_curated
S_p2_S4_coassembly_k141_3389324_17
R_OD1_Uhrbacteria_57_19, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14245..16518)
DNA (2274bp) protein (758aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B789C5
PKD domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_57_19_curated
S_p2_S4_coassembly_k141_3389324_18
R_OD1_Uhrbacteria_60_10, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(17035..17712)
DNA (678bp) protein (226aa)
seg 4..33 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
calcium-binding acidic-repeat protein precursor
Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_60_10_curated
S_p2_S4_coassembly_k141_3389324_trna_1
unknown

Not on your lists

17784..17865
DNA (82bp)
transferRNA Leu
S_p2_S4_coassembly_k141_3389324_19
unknown

Not on your lists

17989..18564
DNA (576bp) protein (192aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3389324_20
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(18679..19107)
DNA (429bp) protein (143aa)
MutT/nudix family protein Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B493A3
MutT/nudix family protein
Tax=CG_CPR10_01
S_p2_S4_coassembly_k141_3389324_21
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

19298..19978
DNA (681bp) protein (227aa)
TM helix protein Tax=uncultured bacterium RepID=K1Z5V9_9BACT
CmpX protein
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
S_p2_S4_coassembly_k141_3389324_22
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

comp(20067..20507)
DNA (441bp) protein (147aa)
MutT/nudix family protein Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B493A3
NUDIX hydrolase
Tax=CG_CPR10_03
S_p2_S4_coassembly_k141_3389324_23
R_RIF_OD1_10_39_19, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(20607..21152)
DNA (546bp) protein (182aa)
Tmk: thymidylate kinase bin=GWF2_CPR3_35_18 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_CPR3_35_18 organism_group=CPR3
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_19_curated
S_p2_S4_coassembly_k141_3389324_24
R_RIF_OD1_12_45_17b, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

21293..21889
DNA (597bp) protein (199aa)
Adenylate cyclase Tax=Halococcus morrhuae DSM 1307 RepID=M0M943_HALMO
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_45_17b_curated
S_p2_S4_coassembly_k141_3389324_25
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(21905..23614)
DNA (1710bp) protein (570aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI00035D30CD
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
S_p2_S4_coassembly_k141_3389324_26
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

23893..24468
DNA (576bp) protein (192aa)
Dephospho-CoA kinase archaeal, predicted (EC:2.7.1.24)
UPF0200 protein Mbar_A0975 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Y975_METBF
Tax=RBG_16_Euryarchaeota_67_27_curated
S_p2_S4_coassembly_k141_3389324_27
unknown

Not on your lists

24677..25162
DNA (486bp) protein (162aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3389324_28
RHI_OP11_Daviesbacteria_43_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(25235..25987)
DNA (753bp) protein (251aa)
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_43_11_curated
Displaying items 1-30 of 34 in total

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