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S5_GD2017_2_S2_scaffold_1957

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_GD2017_2_S2_scaffold_1957_1
GWC2_OD1-i_45_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

3..269
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT88025.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_45_10.;"
protein of unknown function DUF95 transmembrane; K06384 stage II sporulation protein M bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
Integral membrane protein
S5_GD2017_2_S2_scaffold_1957_trna_4
unknown

Not on your lists

comp(543..624)
DNA (82bp)
transferRNA Leu
S5_GD2017_2_S2_scaffold_1957_trna_3
unknown

Not on your lists

comp(718..790)
DNA (73bp)
transferRNA Lys
S5_GD2017_2_S2_scaffold_1957_trna_2
unknown

Not on your lists

comp(876..959)
DNA (84bp)
transferRNA Leu
S5_GD2017_2_S2_scaffold_1957_trna_1
unknown

Not on your lists

comp(997..1068)
DNA (72bp)
transferRNA Cys
S5_GD2017_2_S2_scaffold_1957_2
R_OD1_Uhrbacteria_47_17, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

1225..2418
DNA (1194bp) protein (398aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Uhrbacteria_47_17_curated
S5_GD2017_2_S2_scaffold_1957_3
RLO_OD1_Nomurabacteria_46_14, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2473..2796)
DNA (324bp) protein (108aa)
Ribosome-binding factor A bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_46_14_curated
S5_GD2017_2_S2_scaffold_1957_4

Not on your lists

comp(2800..4326)
DNA (1527bp) protein (509aa)
Translation initiation factor IF-2 protein {ECO:0000313|EMBL:KKP75118.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_35_21.;"
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
infB; translation initiation factor IF-2
S5_GD2017_2_S2_scaffold_1957_5
R_RIF_OD1_09_50_20, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(4313..4774)
DNA (462bp) protein (154aa)
hypothetical protein bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_50_20_curated
S5_GD2017_2_S2_scaffold_1957_6
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

4908..6440
DNA (1533bp) protein (511aa)
Ethanolamine ammonia-lyase, large subunit/small subunit Tax=Planctomyces maris DSM 8797 RepID=A6C3N8_9PLAN
Ethanolamine ammonia-lyase, large subunit/small subunit {ECO:0000313|EMBL:EDL60833.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
eutBC-2; ethanolamine ammonia lyase large subunit
S5_GD2017_2_S2_scaffold_1957_7
R_OD1_Giovannonibacteria_44_11, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(6530..6895)
DNA (366bp) protein (122aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Giovannonibacteria_44_11_curated
S5_GD2017_2_S2_scaffold_1957_8

Not on your lists

6940..8196
DNA (1257bp) protein (419aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2ABL0_9BACT
Cysteine desulfurase {ECO:0000313|EMBL:KKT61815.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
aminotransferase, class V superfamily
S5_GD2017_2_S2_scaffold_1957_9
unknown

Not on your lists

comp(8262..8561)
DNA (300bp) protein (100aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1957_10
RIFOXYD2_FULL_RIF_OD1_11_36_9_curated, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

8645..9979
DNA (1335bp) protein (445aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
Tax=RIFOXYD2_FULL_RIF_OD1_11_36_9_curated
S5_GD2017_2_S2_scaffold_1957_11
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(10030..10782)
DNA (753bp) protein (251aa)
TolA protein bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
surface antigen
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
S5_GD2017_2_S2_scaffold_1957_12
unknown

Not on your lists

comp(10763..11074)
DNA (312bp) protein (104aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1957_13
R_RIF_OD1_11_45_15b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

11188..12324
DNA (1137bp) protein (379aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_11_45_15b_curated
S5_GD2017_2_S2_scaffold_1957_14
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

12334..13707
DNA (1374bp) protein (458aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
glutamyl-tRNA synthetase
Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
S5_GD2017_2_S2_scaffold_1957_15
Parcubacteria bacterium GW2011_GWA1_38_7, Parcubacteria, Bacteria

Not on your lists

13721..15175
DNA (1455bp) protein (485aa)
M23/M37 family Peptidase {ECO:0000313|EMBL:KKQ78195.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_38_7.;"
peptidase M23b bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
spoIIQ; cell wall-binding protein
S5_GD2017_2_S2_scaffold_1957_16
unknown

Not on your lists

15239..15478
DNA (240bp) protein (80aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_1957_17
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

15549..16082
DNA (534bp) protein (178aa)
type 11 methyltransferase bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type 11 methyltransferase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
S5_GD2017_2_S2_scaffold_1957_18
R_RIF_OD1_09_41_20, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

16090..17388
DNA (1299bp) protein (433aa)
transmembrane_regions bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_41_20_curated
S5_GD2017_2_S2_scaffold_1957_19
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

17402..17740
DNA (339bp) protein (113aa)
transmembrane_regions bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
S5_GD2017_2_S2_scaffold_1957_20
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

17761..18117
DNA (357bp) protein (119aa)
transmembrane_regions bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tax=CG_Nomura_04
Displaying 24 items

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