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S5_GD2017_2_S2_scaffold_12225

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_GD2017_2_S2_scaffold_12225_1
unknown

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1..321
DNA (321bp) protein (107aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_12225_2

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comp(437..1363)
DNA (927bp) protein (309aa)
Beta-lactamase domain protein {ECO:0000313|EMBL:KKR47529.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
DNA internalization-like competence protein ComEC/Rec2; K02238 competence protein ComEC bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
S5_GD2017_2_S2_scaffold_12225_3
RLO_RIF_OD1_11_47_20, RIF-OD1-11, Parcubacteria, Bacteria

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comp(1503..1721)
DNA (219bp) protein (73aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_47_20_curated
S5_GD2017_2_S2_scaffold_12225_4
Mageeibacillus indolicus, Mageeibacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1758..2630)
DNA (873bp) protein (291aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Mageeibacillus.;" source="Mageeibacillus indolicus (strain UPII9-5) (Clostridiales genomosp.; BVAB3 (strain UPII9-5)).;"
Putative RIP metalloprotease RseP Tax=Clostridiales genomosp. BVAB3 (strain UPII9-5) RepID=D3R238_CLOB3
putative RIP metalloprotease RseP
S5_GD2017_2_S2_scaffold_12225_5

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comp(2692..3570)
DNA (879bp) protein (293aa)
ATP-cone domain protein {ECO:0000313|EMBL:KKW07219.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_49_16.;"
mtt:Ftrac_2073 ATP-cone domain protein bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
ATP-cone domain-containing protein
S5_GD2017_2_S2_scaffold_12225_6
R_RIF_OD1_12_48_27, RIF-OD1-12, Parcubacteria, Bacteria

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3921..4502
DNA (582bp) protein (194aa)
DedA family protein Tax=Listeria seeligeri FSL S4-171 RepID=E4A0K4_LISSE
alkaline phosphatase
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_12_48_27_curated
S5_GD2017_2_S2_scaffold_12225_7
R_OD1_Kaiserbacteria_49_11, Kaiserbacteria, Parcubacteria, Bacteria

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comp(4548..5891)
DNA (1344bp) protein (448aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI000372D4FC
comEC1; ComE operon protein 3
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_49_11_curated
S5_GD2017_2_S2_scaffold_12225_8
RIFOXYD2_FULL_OD1_44_9_curated, Parcubacteria, Bacteria

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5933..6793
DNA (861bp) protein (287aa)
Polysaccharide deacetylase Tax=uncultured bacterium RepID=K1YKF4_9BACT
xylanase/chitin deacetilase
Tax=RIFOXYD2_FULL_OD1_44_9_curated
S5_GD2017_2_S2_scaffold_12225_9

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comp(6885..7640)
DNA (756bp) protein (252aa)
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease HI Tax=Cystobacter fuscus DSM 2262 RepID=S9PPE2_9DELT
Ribonuclease H {ECO:0000313|EMBL:KKU67945.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_16.;"
S5_GD2017_2_S2_scaffold_12225_10
unknown

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comp(7668..7925)
DNA (258bp) protein (86aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_12225_11
unknown

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comp(7979..8125)
DNA (147bp) protein (49aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_12225_12
R_OD1_Nomurabacteria_42_16, Nomurabacteria, Parcubacteria, Bacteria

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comp(8174..8911)
DNA (738bp) protein (246aa)
Repressor in ring oxydation complex/phenylacetic acid degradation pathway related protein (PaaX) Tax=uncultured bacterium RepID=K2EYU1_9BACT
PaaX family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_42_16_curated
S5_GD2017_2_S2_scaffold_12225_13
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

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comp(9314..10507)
DNA (1194bp) protein (398aa)
single-stranded-DNA-specific exonuclease recJ (EC:3.1.-.-); K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
single-stranded-DNA-specific exonuclease RecJ
Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
Displaying 13 items

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