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S5_GD2017_2_S2_scaffold_3238

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_GD2017_2_S2_scaffold_3238_1
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

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530..2365
DNA (1836bp) protein (612aa)
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
lepA; GTP-binding protein LepA
Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
S5_GD2017_2_S2_scaffold_3238_2
GWF2_OD1_43_32, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

2875..3939
DNA (1065bp) protein (355aa)
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:KKT13804.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWF2_43_32.;"
Filamentation induced by cAMP protein Fic bin=GWE2_Bacteroidetes_41_25 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
Fic family protein
S5_GD2017_2_S2_scaffold_3238_3
GWF1_OD1_34_20, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4095..4544
DNA (450bp) protein (150aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP61307.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWF1_34_20.;"
S5_GD2017_2_S2_scaffold_3238_4
R_OD1_Falkowbacteria_56_16, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4945..5658)
DNA (714bp) protein (238aa)
hypothetical protein; K07090 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_56_16_curated
S5_GD2017_2_S2_scaffold_3238_5

Not on your lists

comp(5660..6136)
DNA (477bp) protein (159aa)
TspO and MBR like protein {ECO:0000313|EMBL:KKS89812.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_11b.;"
TspO and MBR like protein bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
tspO; Tryptophan-rich sensory protein
S5_GD2017_2_S2_scaffold_3238_6
R_OP11_Roizmanbacteria_43_10, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(6323..6718)
DNA (396bp) protein (132aa)
hypothetical protein Tax=Meganema perideroedes RepID=UPI000380BD0C
ybgC; 4-hydroxybenzoyl-CoA thioesterase
Tax=RIFCSPLOWO2_02_FULL_OP11_Roizmanbacteria_43_10_curated
S5_GD2017_2_S2_scaffold_3238_7
unknown

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comp(6767..7468)
DNA (702bp) protein (234aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3238_8

Not on your lists

comp(7834..8883)
DNA (1050bp) protein (350aa)
Uncharacterized protein Tax=Bacillus cereus BAG6X1-2 RepID=J7Y688_BACCE
VanZ like family {ECO:0000313|EMBL:AIA13106.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
VanZ family protein
S5_GD2017_2_S2_scaffold_3238_9
unknown

Not on your lists

comp(8980..9450)
DNA (471bp) protein (157aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3238_10
RIFOXYD1_FULL_RIF_OD1_10_39_35_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

9972..10922
DNA (951bp) protein (317aa)
Resolvase protein (Fragment) Tax=uncultured bacterium RepID=K2B044_9BACT
resolvase domain-containing protein
Tax=RIFOXYD1_FULL_RIF_OD1_10_39_35_curated
S5_GD2017_2_S2_scaffold_3238_11

Not on your lists

10876..11679
DNA (804bp) protein (268aa)
Resolvase domain Tax=mine drainage metagenome RepID=E6QWS7_9ZZZZ bin=ACD51 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
Resolvase domain-containing protein {ECO:0000313|EMBL:KKT62655.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
hypothetical protein
S5_GD2017_2_S2_scaffold_3238_trna_4
unknown

Not on your lists

comp(11668..11740)
DNA (73bp)
transferRNA Asn
S5_GD2017_2_S2_scaffold_3238_trna_1
unknown

Not on your lists

12167..12239
DNA (73bp)
transferRNA Ala
S5_GD2017_2_S2_scaffold_3238_12
GWF2_OD1_38_76, Parcubacteria, Bacteria

Not on your lists

comp(12178..12849)
DNA (672bp) protein (224aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ82159.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_76.;"
site-specific recombinase bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
site-specific recombinase
S5_GD2017_2_S2_scaffold_3238_13
GWF2_OD1_38_76, Parcubacteria, Bacteria

Not on your lists

comp(12846..13634)
DNA (789bp) protein (263aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ82159.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_76.;"
site-specific recombinase bin=WS6_GWC1_33_20 species=WS6_GWE1_33_547 genus=WS6_GWE1_33_547 taxon_order=WS6_GWE1_33_547 taxon_class=WS6_GWE1_33_547 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria)
site-specific recombinase
S5_GD2017_2_S2_scaffold_3238_14
unknown

Not on your lists

comp(13627..13941)
DNA (315bp) protein (105aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3238_15
unknown

Not on your lists

comp(14097..14438)
DNA (342bp) protein (114aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3238_16
R_RIF_OD1_06_43_17b, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(15300..15632)
DNA (333bp) protein (111aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_43_17b_curated
S5_GD2017_2_S2_scaffold_3238_17
unknown

Not on your lists

15990..17066
DNA (1077bp) protein (359aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3238_18
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

17099..18139
DNA (1041bp) protein (347aa)
Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
S5_GD2017_2_S2_scaffold_3238_19
R_RIF_OD1_11_43_32b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

18132..18512
DNA (381bp) protein (127aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_43_32b_curated
S5_GD2017_2_S2_scaffold_3238_20
unknown

Not on your lists

18518..18916
DNA (399bp) protein (133aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3238_21
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19045..20763
DNA (1719bp) protein (573aa)
Glycosyl transferase family 2 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A260_THECD
glycosyl transferase family 2 protein
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACY99713.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
S5_GD2017_2_S2_scaffold_3238_22
unknown

Not on your lists

21386..21571
DNA (186bp) protein (62aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3238_23
unknown

Not on your lists

21568..21765
DNA (198bp) protein (66aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3238_24
GWA2_OD1_42_32, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

21762..22577
DNA (816bp) protein (272aa)
Putative uncharacterized protein Tax=Thiocapsa marina 5811 RepID=F9UH31_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKS56361.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_42_32.;"
conserved hypothetical protein
S5_GD2017_2_S2_scaffold_3238_25
RIFOXYC2_FULL_RIF_OD1_09_47_9_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

22756..23994
DNA (1239bp) protein (413aa)
Putative hemagglutinin Tax=Prevotella copri CAG:164 RepID=R6BT37_9BACT
Tax=RIFOXYC2_FULL_RIF_OD1_09_47_9_curated
S5_GD2017_2_S2_scaffold_3238_26
R_RIF_OD1_11_43_32b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

24093..24692
DNA (600bp) protein (200aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_43_32b_curated
S5_GD2017_2_S2_scaffold_3238_27
unknown

Not on your lists

24772..25098
DNA (327bp) protein (109aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3238_trna_3
unknown

Not on your lists

comp(25312..25383)
DNA (72bp)
transferRNA Glu
Displaying items 1-30 of 42 in total

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