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S5_GD2017_2_S2_scaffold_3252

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_GD2017_2_S2_scaffold_3252_1
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(2..274)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2ES41_9BACT
hypothetical protein
Tax=BJP_IG2158_Nitrospirales_45_240
S5_GD2017_2_S2_scaffold_3252_2
R_OD1_Magasanikbacteria_47_16, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(282..431)
DNA (150bp) protein (50aa)
Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_47_16_curated
S5_GD2017_2_S2_scaffold_3252_3
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(491..1357)
DNA (867bp) protein (289aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
inner-membrane translocator
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
S5_GD2017_2_S2_scaffold_3252_4
R_OD1_Azambacteria_44_14, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(1399..1656)
DNA (258bp) protein (86aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000365D177
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Azambacteria_44_14_curated
S5_GD2017_2_S2_scaffold_3252_5
R_RIF_OD1_10_43_60, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(1658..1885)
DNA (228bp) protein (76aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037EE33C
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_10_43_60_curated
S5_GD2017_2_S2_scaffold_3252_6
unknown

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2201..2404
DNA (204bp) protein (68aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3252_7
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(2448..3332)
DNA (885bp) protein (295aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
inner-membrane translocator
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
S5_GD2017_2_S2_scaffold_3252_8
GWA2_OD1_52_8b, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3433..4068)
DNA (636bp) protein (212aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW32116.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWA2_52_8d.;"
S5_GD2017_2_S2_scaffold_3252_9
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(4220..5323)
DNA (1104bp) protein (368aa)
extracellular ligand-binding receptor bin=PER_GWA2_38_35 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
Uncharacterized protein {ECO:0000313|EMBL:KKQ71913.1}; species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
ABC transporter substrate-binding protein
S5_GD2017_2_S2_scaffold_3252_10
R_OD1_Nomurabacteria_39_18, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5556..6212)
DNA (657bp) protein (219aa)
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway related protein (PaaX); K02616 phenylacetic acid degradation operon negative regulatory protein bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
PaaX domain protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_39_18_curated
S5_GD2017_2_S2_scaffold_3252_11
R_RIF_OD1_11_43_32b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(6359..8014)
DNA (1656bp) protein (552aa)
AAA ATPase bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
helicase
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_43_32b_curated
S5_GD2017_2_S2_scaffold_3252_12
unknown

Not on your lists

comp(8134..8247)
DNA (114bp) protein (38aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3252_13
R_OD1_Kaiserbacteria_54_22, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8392..8622)
DNA (231bp) protein (77aa)
Hypothetical conserved protein bin=GWA1_ZB2_49_26 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
YcfA family protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_54_22_curated
S5_GD2017_2_S2_scaffold_3252_14

Not on your lists

comp(8627..8878)
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS36704.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
UPF0150 protein AF_1072 bin=GWA1_ZB2_49_26 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
S5_GD2017_2_S2_scaffold_3252_15
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8920..10068)
DNA (1149bp) protein (383aa)
Peptide methionine sulfoxide reductase msrB Tax=Desulfovibrio sp. X2 RepID=S7TTY7_9DELT
Peptide methionine sulfoxide reductase msrB {ECO:0000313|EMBL:EPR40506.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
putative methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase
S5_GD2017_2_S2_scaffold_3252_16
GWF2_OD1_38_8, Parcubacteria, Bacteria

Not on your lists

10179..10565
DNA (387bp) protein (129aa)
Vitamin K epoxide reductase {ECO:0000313|EMBL:KKQ87922.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_8.;"
Vitamin K epoxide reductase bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Vitamin K epoxide reductase
S5_GD2017_2_S2_scaffold_3252_17
R_OD1_Kaiserbacteria_48_10, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

10565..11122
DNA (558bp) protein (186aa)
disulfide bond formation protein DsbB; K03611 disulfide bond formation protein DsbB bin=AR5_curated_draft species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
disulfide bond formation protein DsbB
Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_48_10_curated
S5_GD2017_2_S2_scaffold_3252_18
unknown

Not on your lists

11119..11601
DNA (483bp) protein (161aa)
Phage shock protein C, PspC Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZQP9_OPITP
S5_GD2017_2_S2_scaffold_3252_19
unknown

Not on your lists

comp(11745..12020)
DNA (276bp) protein (92aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3252_20
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(12111..13394)
DNA (1284bp) protein (428aa)
Uncharacterized ABC transporter ATP-binding protein ybiT bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
Displaying 20 items

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