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S5_GD2017_2_S2_scaffold_3372

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_GD2017_2_S2_scaffold_3372_1
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(43..462)
DNA (420bp) protein (140aa)
histidine triad (HIT) protein bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
histidine triad (HIT) protein
Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
S5_GD2017_2_S2_scaffold_3372_2
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(459..908)
DNA (450bp) protein (150aa)
Putative uncharacterized protein Tax=Labrenzia aggregata IAM 12614 RepID=A0NUP3_9RHOB bin=ACD76 species=Labrenzia aggregata genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
S5_GD2017_2_S2_scaffold_3372_3
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(919..1731)
DNA (813bp) protein (271aa)
DNA-damage-inducible protein D family protein bin=GWF2_Melioribacter_38_21 species=Prevotella bivia genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
S5_GD2017_2_S2_scaffold_3372_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1737..2261)
DNA (525bp) protein (175aa)
Putative uncharacterized protein Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y9D4_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ29939.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
S5_GD2017_2_S2_scaffold_3372_5
R_RIF_OD1_09_54_12, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(2258..3097)
DNA (840bp) protein (280aa)
Prophage antirepressor bin=GWC2_CP_Nitrospirae-rel_42_7 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
phage antirepressor protein
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_54_12_curated
S5_GD2017_2_S2_scaffold_3372_6
unknown

Not on your lists

comp(3136..3369)
DNA (234bp) protein (78aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3372_7
GWC2_OP11_43_12, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(3375..3896)
DNA (522bp) protein (174aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS92389.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWC2_43_12.;"
P-loop containing nucleoside triphosphate hydrolases bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
S5_GD2017_2_S2_scaffold_3372_8
R_RIF_OD1_09_51_10, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(3905..5626)
DNA (1722bp) protein (574aa)
CTP synthase Tax=uncultured bacterium RepID=K2F160_9BACT
CTP synthase
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_51_10_curated
S5_GD2017_2_S2_scaffold_3372_9
unknown

Not on your lists

5721..5981
DNA (261bp) protein (87aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3372_10
unknown

Not on your lists

6226..6486
DNA (261bp) protein (87aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3372_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(6560..7486)
DNA (927bp) protein (309aa)
Cell division protein FtsX bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
cell division protein FtsX
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
S5_GD2017_2_S2_scaffold_3372_12
GWA1_OD1_40_21, Parcubacteria, Bacteria

Not on your lists

comp(7572..8252)
DNA (681bp) protein (227aa)
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:KKR52953.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;"
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cell division ATP-binding protein FtsE
S5_GD2017_2_S2_scaffold_3372_13
R_RIF_OD1_11_46_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(8381..9280)
DNA (900bp) protein (300aa)
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
prfB; protein release subunit factor B
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_46_13_curated
S5_GD2017_2_S2_scaffold_3372_14
R_RIF_OD1_09_50_20, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(9318..10682)
DNA (1365bp) protein (455aa)
hypothetical protein bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
envC; Septal ring factor
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_50_20_curated
S5_GD2017_2_S2_scaffold_3372_15
GWA1_OD1_47_8, Parcubacteria, Bacteria

Not on your lists


comp(11006..11635)
DNA (630bp) protein (210aa)
50S ribosomal protein L25 {ECO:0000313|EMBL:KKU81786.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_8.;"
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplY; 50S ribosomal protein L25
S5_GD2017_2_S2_scaffold_3372_16
unknown

Not on your lists

11737..12255
DNA (519bp) protein (173aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3372_17
unknown

Not on your lists

comp(12281..12760)
DNA (480bp) protein (160aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3372_18
GWA1_OD1_49_17_curated, Parcubacteria, Bacteria

Not on your lists

comp(12932..13120)
DNA (189bp) protein (63aa)
obgE; GTPase ObgE; K03979 GTP-binding protein bin=bin11_novelCP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=bin11_novelCP organism_group=Unknown_CP
Tax=GWA1_OD1_49_17_curated
S5_GD2017_2_S2_scaffold_3372_19
R_OD1_48_10, Parcubacteria, Bacteria

Not on your lists

comp(13090..13743)
DNA (654bp) protein (218aa)
GTPase Obg Tax=uncultured bacterium RepID=K2ER88_9BACT
obgE; GTPase ObgE
Tax=RIFCSPLOWO2_01_FULL_OD1_48_10_curated
S5_GD2017_2_S2_scaffold_3372_20
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

13852..15528
DNA (1677bp) protein (559aa)
Thiamine pyrophosphate enzyme Tax=Synechococcus sp. PCC 7336 RepID=UPI00034AC515
indolepyruvate/phenylpyruvate decarboxylase
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
S5_GD2017_2_S2_scaffold_3372_21
R_OD1_56_18, Parcubacteria, Bacteria

Not on your lists

comp(15569..17533)
DNA (1965bp) protein (655aa)
GTP-binding protein TypA/BipA bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
GTP-binding protein TypA/BipA
Tax=RIFCSPHIGHO2_01_FULL_OD1_56_18_curated
S5_GD2017_2_S2_scaffold_3372_22
unknown

Not on your lists

comp(17530..17823)
DNA (294bp) protein (98aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_3372_23
R_SM2F11_50_11, SM2F11, Bacteria

Not on your lists

comp(17943..18947)
DNA (1005bp) protein (335aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1Z2W3_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_50_11_curated
S5_GD2017_2_S2_scaffold_3372_24
R_OD1_Moranbacteria_55_24, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(18990..19229)
DNA (240bp) protein (80aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Moranbacteria_55_24_curated
Displaying 24 items

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