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S5_GD2017_2_S2_scaffold_5990_16

Organism: GD2017-2_S2_QB3_180125_Parcubacteria_47_8

near complete RP 39 / 55 MC: 1 BSCG 42 / 51 ASCG 10 / 38 MC: 1
Location: 12216..13673

Top 3 Functional Annotations

Value Algorithm Source
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 482.0
  • Bit_score: 502
  • Evalue 2.90e-139
SecD/SecF family protein-export membrane protein similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 448.0
  • Bit_score: 322
  • Evalue 1.20e-85
Tax=RifOxyC12_full_RIF_OD1_09_46_25_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 493.0
  • Bit_score: 528
  • Evalue 9.10e-147

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Taxonomy

RifOxyC12_full_RIF_OD1_09_46_25_curated → RIF-OD1-9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1458
ATGGGAAAAACCAGGTTTTATGCGGTACTTCTGATCCTCTTTGGGCTCGCGCTCGGGTACTTTGACTTCGCTTCCGAAGCGAAGCATTTTGCCGTGCTTGATAAGCTTCATATTACCCCCCGCGAGTCTCTTCAGAAATATGGCTTGAAGCTCGGACTCGATCTTCAGGGCGGTACCCATCTTGTGTATAAAGCGGATATGTCGCAGCTCGCCTCAAGTACCGTTGCGGATGCAAAAAGCGTGAGCGATTCCATGGAGGCGCTCCGCGATGTCATTGATCGCCGCGTCAACCTTTTCGGCGTAGCGGAACCGCTTGTGCAGGTAGAACAGGGGAGTTTCCTCGCTTCCGGAGAGCAGCAAGAACGTTTGATTGTTGAGCTTCCGGGGCTTACGGATGTAAACAAAGCGGTACAGATGATCGGCGCTACTCCGGTGCTTGAGTTCCGGCTTGAACGCCCGGCGGAGGAGCGCGATGCCATAATCAAAGCTCAGGAAGAATACCGGAAGCTCGCTGAAGAAGCGAAGAATGCGGGAAACCCGGCACCGGAACCAACGAACCCGCTCCTTTTTGAAGAACTGTATAATCCAACGGAGTTAACGGGGCGATACTTAACAAAAGCGGAACTCCAATTCGACAGCTCCGCAGGAGGGCTTGGCGACCCTCGTGTCGGCATTACGTTCAACGCCGAAGGGAAAGACCTTTTTGCAAAGATTACGCGGGAGAATGTAGGGAAACAGCTTGCAATTTATCTCGATGGCGCTCCGATTTCTGCGCCGACCATTCGGGAGGAAATATCAAGCGGCAGCGCTGAAATTTCCGGATCTTTTACGCTAGAAGAAGCCAAACAACTGGTCGGACGCTTGAATTCGGGCGCGCTTCCTGTCCCTATCGAGCTTTTGTCCGCGCAGTCCATTGGTGCAACTCTCGGACAGGAAGCTTACGCTTCGACTGTGCGCGCGGGAATCATCGGCTTCCTTATCGTCGCGTGTTTCATGATTCTCTGGTATCGCTTGCCGGGATTCCTTGCGGCTATCTCCCTGTCGATGTATGCCGCGTTGATGATCGCTATTTTTAAACTCTTGCCGGTGACGATGACTGCCGCGGGTATCGCCGGGTTCATTTTGACTATCGGTATGGCGGTGGATGCGAACATTCTCATCTTTGAACGTATGAAAGAAGAAGTGAGGCGAGGGCGCGCGCTTCACGATGCTATTCTCGAAGGGTTCGCGCGTGCATGGACTTCTATCCGCGACAGCAACCTTTCTTCGATCATCAGCGCCGTCATTCTTTTTTGGTTCGGAACATCAATGGTAAAAGGGTTTGCGCTCGTGCTTGGCATCGGCGTTACGGTAAGCATGTTCACGGCTTTGACCTTCACTCGTACGCTCCTTTTGGCGCTTGGTGCGGCAGGGGAGAGTAAATTTGTGAAGTTTTTATTCGGAAGCGGAATAAAATAG
PROTEIN sequence
Length: 486
MGKTRFYAVLLILFGLALGYFDFASEAKHFAVLDKLHITPRESLQKYGLKLGLDLQGGTHLVYKADMSQLASSTVADAKSVSDSMEALRDVIDRRVNLFGVAEPLVQVEQGSFLASGEQQERLIVELPGLTDVNKAVQMIGATPVLEFRLERPAEERDAIIKAQEEYRKLAEEAKNAGNPAPEPTNPLLFEELYNPTELTGRYLTKAELQFDSSAGGLGDPRVGITFNAEGKDLFAKITRENVGKQLAIYLDGAPISAPTIREEISSGSAEISGSFTLEEAKQLVGRLNSGALPVPIELLSAQSIGATLGQEAYASTVRAGIIGFLIVACFMILWYRLPGFLAAISLSMYAALMIAIFKLLPVTMTAAGIAGFILTIGMAVDANILIFERMKEEVRRGRALHDAILEGFARAWTSIRDSNLSSIISAVILFWFGTSMVKGFALVLGIGVTVSMFTALTFTRTLLLALGAAGESKFVKFLFGSGIK*