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S5_GD2017_2_S2_scaffold_5990

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_GD2017_2_S2_scaffold_5990_1
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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3..698
DNA (696bp) protein (232aa)
Putative uncharacterized protein Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3AS82_CHLCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB28143.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium chlorochromatii (strain CaD3).;"
S5_GD2017_2_S2_scaffold_5990_2
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

695..1429
DNA (735bp) protein (245aa)
Putative uncharacterized protein Tax=Beggiatoa sp. PS RepID=A7BT34_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN70302.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
S5_GD2017_2_S2_scaffold_5990_3
RifOxyC12_full_RIF_OD1_09_46_25_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(1504..2955)
DNA (1452bp) protein (484aa)
GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) ((P)ppGpp synthetase) (EC:2.7.6.5)
(P)ppGpp synthetase bin=GWA2_OP3_52_12 species=uncultured bacterium CSLC2 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=RifOxyC12_full_RIF_OD1_09_46_25_curated
S5_GD2017_2_S2_scaffold_5990_4
R_RIF_OD1_09_51_10, RIF-OD1-9, Parcubacteria, Bacteria

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3142..3528
DNA (387bp) protein (129aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_51_10_curated
S5_GD2017_2_S2_scaffold_5990_5
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

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3549..3935
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY87_9BACT
Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
S5_GD2017_2_S2_scaffold_5990_6
R_OD1_Kaiserbacteria_51_21, Kaiserbacteria, Parcubacteria, Bacteria

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4210..4473
DNA (264bp) protein (88aa)
DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA polymerase III subunits gamma and tau
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_51_21_curated
S5_GD2017_2_S2_scaffold_5990_7
R_RIF_OD1_09_51_10, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

4534..5178
DNA (645bp) protein (215aa)
DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_51_10_curated
S5_GD2017_2_S2_scaffold_5990_8
GWC1_OD1_36_9, Parcubacteria, Bacteria

Not on your lists

5308..5964
DNA (657bp) protein (219aa)
phosphoglycerate mutase (EC:5.4.2.1)
Fructose-2,6-bisphosphatase Tax=Glaciecola arctica BSs20135 RepID=K6Y988_9ALTE bin=OP11_3 species=Glaciecola arctica genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome
Phosphoglycerate mutase, phosphoglycerate mutase {ECO:0000313|EMBL:KKQ20101.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_36_9.;"
S5_GD2017_2_S2_scaffold_5990_9
R_RIF_OD1_09_41_20, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists


6181..6924
DNA (744bp) protein (248aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] bin=OD1_GWC2_34_28 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
pheS; phenylalanyl-tRNA synthetase alpha chain (Phenylalanine--tRNA ligase alpha chain) (EC:6.1.1.20)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_41_20_curated
S5_GD2017_2_S2_scaffold_5990_10
GWA1_OD1_40_21, Parcubacteria, Bacteria

Not on your lists

6941..7330
DNA (390bp) protein (130aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035C3635
Uncharacterized protein {ECO:0000313|EMBL:KKR53827.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;"
hypothetical protein
S5_GD2017_2_S2_scaffold_5990_11
GWA1_OD1_40_21, Parcubacteria, Bacteria

Not on your lists

7444..9333
DNA (1890bp) protein (630aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine-tRNA ligase beta subunit Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVJ7_9BACT
Phenylalanine-tRNA ligase beta subunit {ECO:0000313|EMBL:KKR53353.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;"
S5_GD2017_2_S2_scaffold_5990_12
unknown

Not on your lists

9369..9650
DNA (282bp) protein (94aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_5990_13
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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9755..10531
DNA (777bp) protein (259aa)
Peptidase C26 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUL8_RUBXD
peptidase C26
Peptidase C26 {ECO:0000313|EMBL:ABG04910.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
S5_GD2017_2_S2_scaffold_5990_14
GWA2_OD1_47_10, Parcubacteria, Bacteria

Not on your lists

10613..11416
DNA (804bp) protein (268aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU51920.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10.;"
hypothetical protein bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria)
hypothetical protein
S5_GD2017_2_S2_scaffold_5990_15
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(11468..12118)
DNA (651bp) protein (217aa)
phosphoesterase PA-phosphatase related protein bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
PA-phosphatase-like phosphoesterase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_36_15_curated
S5_GD2017_2_S2_scaffold_5990_16
RifOxyC12_full_RIF_OD1_09_46_25_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

12216..13673
DNA (1458bp) protein (486aa)
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
SecD/SecF family protein-export membrane protein
Tax=RifOxyC12_full_RIF_OD1_09_46_25_curated
S5_GD2017_2_S2_scaffold_5990_17
unknown

Not on your lists

13693..13788
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 17 items

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