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ACD13_27

Alias: ACD13_27842.84310.19

Search features with annotation key words

Displaying items 31-60 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD13_27_31
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(23686..24222)
DNA (537bp) protein (179aa)
Cob(I)alamin adenosyltransferase
ATP--cobalamin adenosyltransferase n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NQI0_ROSCS (db=UNIREF evalue=6.0e-29 bit_score=130.0 identity=42.54 coverage=97.7653631284916)
seg (db=Seg db_id=seg from=17 to=32)
seg (db=Seg db_id=seg from=54 to=67)
ACD13_27_32
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(24234..26690)
DNA (2457bp) protein (819aa)
Ribonucleoside-diphosphate reductase n=2 Tax=Syntrophus aciditrophicus SB RepID=Q2LW74_SYNAS (db=UNIREF evalue=0.0 bit_score=758.0 identity=49.87 coverage=91.8192918192918)
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
seg (db=Seg db_id=seg from=6 to=22)
ACD13_27_33
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(26693..27130)
DNA (438bp) protein (146aa)
transcriptional regulator NrdR
TIGR00244: transcriptional regulator NrdR (db=HMMTigr db_id=TIGR00244 from=1 to=145 evalue=3.1e-46 interpro_id=IPR003796 interpro_description=Ribonucleotide reductase regulator NrdR-like)
ATP-cone (db=HMMPfam db_id=PF03477 from=50 to=134 evalue=4.6e-17 interpro_id=IPR005144 interpro_description=ATP-cone)
ATP_CONE (db=ProfileScan db_id=PS51161 from=48 to=138 evalue=19.791 interpro_id=IPR005144 interpro_description=ATP-cone)
ACD13_27_34
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(27389..28009)
DNA (621bp) protein (207aa)
seg (db=Seg db_id=seg from=4 to=23)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
Uncharacterized protein {ECO:0000313|EMBL:KKR58725.1}; TaxID=1618588 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_40_30.;"
ACD13_27_35
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(28054..28704)
DNA (651bp) protein (217aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=198 to=215)
transmembrane_regions (db=TMHMM db_id=tmhmm from=171 to=193)
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=166)
seg (db=Seg db_id=seg from=39 to=50)
ACD13_27_36
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(28755..29264)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC8_9BACT (db=UNIREF evalue=2.0e-24 bit_score=114.0 identity=38.61 coverage=87.6470588235294)
Uncharacterized protein {ECO:0000313|EMBL:KKR53039.1}; TaxID=1618595 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWD2_40_19.;"
hypothetical protein
ACD13_27_37
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

29358..31580
DNA (2223bp) protein (741aa)
hypothetical protein
hypothetical protein
Penicillin-binding protein, 1A family n=2 Tax=Chloroflexus RepID=A9WDV7_CHLAA (db=UNIREF evalue=5.0e-116 bit_score=422.0 identity=40.45 coverage=86.3697705802969)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
ACD13_27_38

Not on your lists

comp(31609..31830)
DNA (222bp) protein (74aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=19 to=38)
Uncharacterized protein {ECO:0000313|EMBL:EKE13007.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_27_39

Not on your lists

comp(33955..34620)
DNA (666bp) protein (222aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=192 to=214)
transmembrane_regions (db=TMHMM db_id=tmhmm from=166 to=185)
transmembrane_regions (db=TMHMM db_id=tmhmm from=107 to=141)
transmembrane_regions (db=TMHMM db_id=tmhmm from=64 to=86)
ACD13_27_40
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(34629..34946)
DNA (318bp) protein (106aa)
seg (db=Seg db_id=seg from=6 to=17)
seg (db=Seg db_id=seg from=32 to=50)
seg (db=Seg db_id=seg from=51 to=68)
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=73)
ACD13_27_41
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(34969..35979)
DNA (1011bp) protein (337aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (EC:1.1.1.26)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (EC:1.1.1.26)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Thermotoga lettingae TMO RepID=A8F7W7_THELT (db=UNIREF evalue=1.0e-80 bit_score=303.0 identity=47.72 coverage=94.6587537091988)
D_2_HYDROXYACID_DH_2 (db=PatternScan db_id=PS00670 from=206 to=228 evalue=0.0 interpro_id=IPR006140 interpro_description=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: cofactor binding (GO:0048037))
ACD13_27_42
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(35991..36998)
DNA (1008bp) protein (336aa)
Putative sugar kinase n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVB3_9BACT (db=UNIREF evalue=3.0e-57 bit_score=226.0 identity=39.5 coverage=92.8571428571429)
hypothetical protein
PFKB_KINASES_1 (db=PatternScan db_id=PS00583 from=57 to=81 evalue=0.0 interpro_id=IPR002173 interpro_description=Carbohydrate/puine kinase, PfkB, conserved site)
Ribokinase-like (db=superfamily db_id=SSF53613 from=4 to=325 evalue=2.1e-51)
ACD13_27_43
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(36976..37953)
DNA (978bp) protein (326aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Glycolytic (db=HMMPfam db_id=PF00274 from=2 to=324 evalue=2.8e-113 interpro_id=IPR000741 interpro_description=Fructose-bisphosphate aldolase, class-I GO=Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332), Biological Process: glycolysis (GO:0006096))
Aldolase (db=superfamily db_id=SSF51569 from=1 to=324 evalue=5.1e-112)
FRUCTOSE-BISPHOSPHATE ALDOLASE (db=HMMPanther db_id=PTHR11627 from=3 to=313 evalue=4.2e-101 interpro_id=IPR000741 interpro_description=Fructose-bisphosphate aldolase, class-I GO=Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332), Biological Process: glycolysis (GO:0006096))
ACD13_27_44
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

38005..38577
DNA (573bp) protein (191aa)
hypothetical protein (db=KEGG evalue=4.0e-13 bit_score=77.8 identity=33.61 coverage=60.7329842931937)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
Gmad2 (db=HMMPfam db_id=PF10648 from=90 to=176 evalue=9.9e-08 interpro_id=IPR018911 interpro_description=Spore germination protein-like Gmad2, bacteria)
hypothetical protein alias=ACD13_27842.84310.19G0044,ACD13_27842.84310.19_44,ACD13_C00027G00044 id=6848 tax=ACD13 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
ACD13_27_45

Not on your lists

38596..39258
DNA (663bp) protein (221aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=55)
seg (db=Seg db_id=seg from=65 to=82)
seg (db=Seg db_id=seg from=35 to=47)
seg (db=Seg db_id=seg from=9 to=22)
ACD13_27_46
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(39255..40199)
DNA (945bp) protein (315aa)
Transketolase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZW6_UNCTG (db=UNIREF evalue=4.0e-82 bit_score=308.0 identity=51.45 coverage=97.4603174603175)
transketolase
transketolase
1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE (db=HMMPanther db_id=PTHR11624:SF20 from=30 to=313 evalue=1.5e-77)
ACD13_27_47
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(40199..40975)
DNA (777bp) protein (259aa)
transketolase
seg (db=Seg db_id=seg from=110 to=122)
TRANSKETOLASE_1 (db=PatternScan db_id=PS00801 from=16 to=36 evalue=0.0 interpro_id=IPR005474 interpro_description=Transketolase, N-terminal)
no description (db=Gene3D db_id=G3DSA:3.40.50.970 from=3 to=257 evalue=3.8e-75)
ACD13_27_48
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(40991..41317)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVB7_9BACT (db=UNIREF evalue=4.0e-13 bit_score=77.0 identity=41.86 coverage=77.9816513761468)
MoCo carrier protein-like (db=superfamily db_id=SSF102405 from=2 to=85 evalue=2.8e-11)
Lysine_decarbox (db=HMMPfam db_id=PF03641 from=3 to=82 evalue=2.7e-10 interpro_id=IPR005269 interpro_description=Conserved hypothetical protein CHP00730)
no description (db=Gene3D db_id=G3DSA:3.40.50.450 from=2 to=88 evalue=3.8e-05)
ACD13_27_49

Not on your lists

comp(41675..42778)
DNA (1104bp) protein (368aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
seg (db=Seg db_id=seg from=125 to=137)
GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (db=HMMPanther db_id=PTHR10836 from=2 to=351 evalue=8.3e-139 interpro_id=IPR000173 interpro_description=Glyceraldehyde 3-phosphate dehydrogenase subfamily GO=Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity (GO:0004365), Biological Process: glucose metabolic process (GO:0006006), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
ACD13_27_50

Not on your lists

42871..43557
DNA (687bp) protein (229aa)
glycosyltransferase
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=192 evalue=7.1e-44)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=1 to=195 evalue=6.3e-36)
Glycos_transf_2 (db=HMMPfam db_id=PF00535 from=4 to=128 evalue=2.0e-30 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
ACD13_27_51
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(43559..43756)
DNA (198bp) protein (66aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
DUF378 (db=HMMPfam db_id=PF04070 from=3 to=55 evalue=2.8e-11 interpro_id=IPR007211 interpro_description=Protein of unknown function DUF378)
Uncharacterized protein {ECO:0000313|EMBL:KKR51832.1}; TaxID=1618595 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWD2_40_19.;"
ACD13_27_52
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(43807..44766)
DNA (960bp) protein (320aa)
hypothetical protein
Phosphoglycerate kinase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYI8_ACIFD (db=UNIREF evalue=6.0e-51 bit_score=204.0 identity=35.11 coverage=99.375)
Phosphoglycerate kinase (db=superfamily db_id=SSF53748 from=2 to=319 evalue=1.3e-75 interpro_id=IPR001576 interpro_description=Phosphoglycerate kinase GO=Molecular Function: phosphoglycerate kinase activity (GO:0004618), Biological Process: glycolysis (GO:0006096))
PHOSPHOGLYCERATE KINASE (db=HMMPanther db_id=PTHR11406 from=6 to=319 evalue=2.5e-47 interpro_id=IPR001576 interpro_description=Phosphoglycerate kinase GO=Molecular Function: phosphoglycerate kinase activity (GO:0004618), Biological Process: glycolysis (GO:0006096))
ACD13_27_53
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(44768..45217)
DNA (450bp) protein (150aa)
ribose-5-phosphate isomerase B
Putative ribose-5-phosphate isomerase B (Phosphoriboisomerase B) n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVB8_9BACT (db=UNIREF evalue=9.0e-26 bit_score=119.0 identity=41.5 coverage=97.3333333333333)
Sugar-phosphate isomerase, RpiB/LacA/LacB types (db=HMMPIR db_id=PIRSF005384 from=1 to=149 evalue=2.7e-39 interpro_id=IPR003500 interpro_description=Ribose/galactose isomerase GO=Biological Process: carbohydrate metabolic process (GO:0005975))
Ribose/Galactose isomerase RpiB/AlsB (db=superfamily db_id=SSF89623 from=1 to=149 evalue=4.9e-37 interpro_id=IPR003500 interpro_description=Ribose/galactose isomerase GO=Biological Process: carbohydrate metabolic process (GO:0005975))
ACD13_27_54
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(45214..45873)
DNA (660bp) protein (220aa)
triosephosphate isomerase TIM (EC:5.3.1.1)
seg (db=Seg db_id=seg from=192 to=204)
no description (db=Gene3D db_id=G3DSA:3.20.20.70 from=2 to=218 evalue=4.8e-47 interpro_id=IPR013785 interpro_description=Aldolase-type TIM barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
Triosephosphate isomerase (TIM) (db=superfamily db_id=SSF51351 from=34 to=218 evalue=7.8e-27 interpro_id=IPR000652 interpro_description=Triosephosphate isomerase GO=Molecular Function: triose-phosphate isomerase activity (GO:0004807), Biological Process: metabolic process (GO:0008152))
ACD13_27_55
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(45870..46124)
DNA (255bp) protein (85aa)
hypothetical protein
Glutaredoxin n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVQ1_9FIRM (db=UNIREF evalue=8.0e-12 bit_score=72.8 identity=38.75 coverage=84.7058823529412)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=1 to=81 evalue=2.1e-15 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
Glutaredoxin (db=HMMPfam db_id=PF00462 from=3 to=53 evalue=2.3e-13 interpro_id=IPR002109 interpro_description=Glutaredoxin GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: protein disulfide oxidoreductase activity (GO:0015035), Biological Process: cell redox homeostasis (GO:0045454))
ACD13_27_56
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(46167..46595)
DNA (429bp) protein (143aa)
seg (db=Seg db_id=seg from=2 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=19)
Tax=GWD2_OP11_40_19
ACD13_27_57

Not on your lists

46723..46935
DNA (213bp) protein (71aa)
46723..46935 + (rbs_motif=TAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE12975.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_27_58

Not on your lists

47032..47889
DNA (858bp) protein (286aa)
seg (db=Seg db_id=seg from=225 to=239)
Uncharacterized protein {ECO:0000313|EMBL:EKE12976.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_27_59
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(47886..49385)
DNA (1500bp) protein (500aa)
L-lactate permease
transmembrane_regions (db=TMHMM db_id=tmhmm from=239 to=261)
transmembrane_regions (db=TMHMM db_id=tmhmm from=282 to=304)
transmembrane_regions (db=TMHMM db_id=tmhmm from=314 to=333)
ACD13_27_60
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(49404..49970)
DNA (567bp) protein (189aa)
elongation factor P
efp: translation elongation factor P (db=HMMTigr db_id=TIGR00038 from=4 to=187 evalue=5.3e-71 interpro_id=IPR011768 interpro_description=Translation elongation factor P GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: cytoplasm (GO:0005737), Biological Process: translational elongation (GO:0006414))
Translation elongation factor P (db=HMMPIR db_id=PIRSF005901 from=1 to=188 evalue=3.7e-40 interpro_id=IPR020599 interpro_description=Translation elongation factor P/YeiP)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=67 to=131 evalue=1.5e-20 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
Displaying items 31-60 of 96 in total

View Taxonomy