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ACD13_27

Alias: ACD13_27842.84310.19

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD13_27_1
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(1..141)
DNA (141bp) protein (47aa)
seg (db=Seg db_id=seg from=29 to=47)
Uncharacterized protein {ECO:0000313|EMBL:KKR57922.1}; TaxID=1618588 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_40_30.;"
ACD13_27_2
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(167..487)
DNA (321bp) protein (107aa)
thioredoxin
thioredoxin: thioredoxin (db=HMMTigr db_id=TIGR01068 from=6 to=106 evalue=1.6e-45 interpro_id=IPR005746 interpro_description=Thioredoxin GO=Biological Process: glycerol ether metabolic process (GO:0006662), Molecular Function: electron carrier activity (GO:0009055), Molecular Function: protein disulfide oxidoreductase activity (GO:0015035), Biological Process: cell redox homeostasis (GO:0045454))
THIOREDOXIN-RELATED (db=HMMPanther db_id=PTHR10438 from=12 to=103 evalue=3.9e-38 interpro_id=IPR015467 interpro_description=Thioredoxin, core GO=Biological Process: cell redox homeostasis (GO:0045454))
THIOREDOXIN M(MITOCHONDRIAL)-TYPE (db=HMMPanther db_id=PTHR10438:SF13 from=12 to=103 evalue=3.9e-38)
ACD13_27_3
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

615..1058
DNA (444bp) protein (148aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=121 to=143)
transmembrane_regions (db=TMHMM db_id=tmhmm from=86 to=108)
transmembrane_regions (db=TMHMM db_id=tmhmm from=59 to=81)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
ACD13_27_4
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

1060..1590
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N3Q2_9GAMM (db=UNIREF evalue=1.0e-39 bit_score=165.0 identity=53.14 coverage=96.045197740113)
seg (db=Seg db_id=seg from=101 to=114)
Uncharacterized protein {ECO:0000313|EMBL:KKR57919.1}; TaxID=1618588 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_40_30.;"
hypothetical protein
ACD13_27_5
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(1598..2131)
DNA (534bp) protein (178aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=159 to=176)
transmembrane_regions (db=TMHMM db_id=tmhmm from=96 to=118)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=23)
ACD13_27_6
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(2157..2483)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT2_9ACTN (db=UNIREF evalue=5.0e-21 bit_score=103.0 identity=49.5 coverage=89.9082568807339)
methylated-DNA--protein-cysteine methyltransferase
DNA_binding_1 (db=HMMPfam db_id=PF01035 from=12 to=93 evalue=1.0e-23 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
Methylated DNA-protein cysteine methyltransferase, C-terminal domain (db=superfamily db_id=SSF46767 from=8 to=91 evalue=1.6e-19 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
ACD13_27_7
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(2455..2736)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC1_9BACT (db=UNIREF evalue=5.0e-15 bit_score=83.6 identity=49.45 coverage=94.6808510638298)
Uncharacterized protein {ECO:0000313|EMBL:KKR57916.1}; TaxID=1618588 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_40_30.;"
hypothetical protein
ACD13_27_8
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(2712..3182)
DNA (471bp) protein (157aa)
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VS56_9CORY (db=UNIREF evalue=3.0e-23 bit_score=110.0 identity=44.25 coverage=69.4267515923567)
seg (db=Seg db_id=seg from=137 to=152)
PEPT_TRNA_HYDROL_1 (db=PatternScan db_id=PS01195 from=14 to=27 evalue=0.0 interpro_id=IPR018171 interpro_description=Peptidyl-tRNA hydrolase, conserved site GO=Molecular Function: aminoacyl-tRNA hydrolase activity (GO:0004045), Biological Process: translation (GO:0006412))
ACD13_27_9
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(3157..3720)
DNA (564bp) protein (188aa)
phosphoribosyltransferase
seg (db=Seg db_id=seg from=15 to=27)
seg (db=Seg db_id=seg from=137 to=148)
PRTase-like (db=superfamily db_id=SSF53271 from=1 to=181 evalue=1.0e-26)
ACD13_27_10
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(3763..4092)
DNA (330bp) protein (110aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=84)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=60)
ACD13_27_11
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(4160..5851)
DNA (1692bp) protein (564aa)
hypothetical protein
hypothetical protein
DNA ligase n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC2_9BACT (db=UNIREF evalue=5.0e-109 bit_score=398.0 identity=40.64 coverage=99.290780141844)
dnl1: DNA ligase I, ATP-dependent (dnl1) (db=HMMTigr db_id=TIGR00574 from=57 to=561 evalue=2.1e-104 interpro_id=IPR000977 interpro_description=ATP-dependent DNA ligase GO=Molecular Function: DNA ligase (ATP) activity (GO:0003910), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication (GO:0006260), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
ACD13_27_12

Not on your lists

comp(5892..6098)
DNA (207bp) protein (69aa)
seg (db=Seg db_id=seg from=38 to=54)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
Uncharacterized protein {ECO:0000313|EMBL:EKE13019.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_27_13

Not on your lists

comp(6111..7175)
DNA (1065bp) protein (355aa)
hypothetical protein
Fic-like (db=superfamily db_id=SSF140931 from=78 to=273 evalue=2.6e-41)
Fic (db=HMMPfam db_id=PF02661 from=105 to=207 evalue=9.7e-20 interpro_id=IPR003812 interpro_description=Filamentation induced by cAMP/death on curing, related)
gb def: Hypothetical protein ZK593.8 (db=HMMPanther db_id=PTHR13504:SF11 from=48 to=212 evalue=2.1e-16)
ACD13_27_14

Not on your lists

comp(7221..8030)
DNA (810bp) protein (270aa)
carbohydrate kinase
seg (db=Seg db_id=seg from=228 to=242)
seg (db=Seg db_id=seg from=199 to=211)
no description (db=Gene3D db_id=G3DSA:3.40.1190.20 from=3 to=267 evalue=5.4e-33)
ACD13_27_15

Not on your lists

8052..8321
DNA (270bp) protein (90aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=43)
seg (db=Seg db_id=seg from=64 to=80)
Uncharacterized protein {ECO:0000313|EMBL:EKE13022.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_27_16
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(8318..8644)
DNA (327bp) protein (109aa)
8318..8644 - (rbs_motif=ATA rbs_spacer=5bp)
Uncharacterized protein {ECO:0000313|EMBL:KKR61794.1}; TaxID=1618553 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_40_43.;"
ACD13_27_17

Not on your lists

comp(8654..9718)
DNA (1065bp) protein (355aa)
DNA replication and repair protein RecF
DNA replication and repair protein recF n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC4_9BACT (db=UNIREF evalue=7.0e-64 bit_score=248.0 identity=39.59 coverage=93.8028169014084)
RECF_1 (db=PatternScan db_id=PS00617 from=128 to=148 evalue=0.0 interpro_id=IPR018078 interpro_description=DNA-binding, RecF, conserved site GO=Molecular Function: single-stranded DNA binding (GO:0003697), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
recf: DNA replication and repair protein Rec (db=HMMTigr db_id=TIGR00611 from=1 to=353 evalue=6.9e-46 interpro_id=IPR001238 interpro_description=DNA-binding, RecF GO=Molecular Function: single-stranded DNA binding (GO:0003697), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
ACD13_27_18
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(9731..11122)
DNA (1392bp) protein (464aa)
hypothetical protein
seg (db=Seg db_id=seg from=390 to=408)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=204 to=453 evalue=1.0e-26)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=204 to=433 evalue=1.4e-23)
ACD13_27_19
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(11135..12007)
DNA (873bp) protein (291aa)
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FAPY-DNA GLYCOSYLASE) (db=HMMPanther db_id=PTHR22993:SF4 from=19 to=290 evalue=2.9e-26)
FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (db=HMMPanther db_id=PTHR22993 from=19 to=290 evalue=2.9e-26)
N-terminal domain of MutM-like DNA repair proteins (db=superfamily db_id=SSF81624 from=2 to=143 evalue=7.1e-26 interpro_id=IPR012319 interpro_description=DNA glycosylase/AP lyase, catalytic domain GO=Molecular Function: damaged DNA binding (GO:0003684), Molecular Function: DNA-(apurinic or apyrimidinic site) lyase activity (GO:0003906), Biological Process: base-excision repair (GO:0006284), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity, hydrolyzing N-glycosyl comp
ACD13_27_20
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(12000..13115)
DNA (1116bp) protein (372aa)
glycosyl transferase group 1
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=2 to=370 evalue=3.7e-91)
GLYCOSYL TRANSFERASE (db=HMMPanther db_id=PTHR12526:SF21 from=2 to=370 evalue=3.7e-91)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=1 to=369 evalue=1.7e-56)
ACD13_27_21
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(13122..13520)
DNA (399bp) protein (133aa)
DNA polymerase I (EC:2.7.7.7)
5' to 3' exonuclease, C-terminal subdomain (db=superfamily db_id=SSF47807 from=3 to=120 evalue=6.9e-34 interpro_id=IPR020045 interpro_description=5'-3' exonuclease, C-terminal subdomain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: catalytic activity (GO:0003824))
5_3_exonuc (db=HMMPfam db_id=PF01367 from=3 to=100 evalue=2.3e-33 interpro_id=IPR020047 interpro_description=5'-3' exonuclease, SAM-fold domain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: 5'-3' exonuclease activity (GO:0008409))
DNA POLYMERASE I (db=HMMPanther db_id=PTHR10133 from=1 to=124 evalue=1.4e-24)
ACD13_27_22
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(14117..16003)
DNA (1887bp) protein (629aa)
hypothetical protein
hypothetical protein
ATP-dependent metalloprotease FtsH n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CGB2_THET1 (db=UNIREF evalue=4.0e-145 bit_score=518.0 identity=49.73 coverage=88.7122416534181)
transmembrane_regions (db=TMHMM db_id=tmhmm from=132 to=154)
ACD13_27_23
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(16025..16393)
DNA (369bp) protein (123aa)
Methionine-tRNA ligase
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=2 to=122 evalue=4.4e-24 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=1 to=121 evalue=8.3e-22 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
tRNA_bind (db=HMMPfam db_id=PF01588 from=14 to=118 evalue=5.2e-11 interpro_id=IPR002547 interpro_description=tRNA-binding domain GO=Molecular Function: tRNA binding (GO:0000049))
ACD13_27_24

Not on your lists

comp(16393..17379)
DNA (987bp) protein (329aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
trpS: tryptophan--tRNA ligase (db=HMMTigr db_id=TIGR00233 from=1 to=326 evalue=1.7e-99 interpro_id=IPR002306 interpro_description=Tryptophanyl-tRNA synthetase, class Ib GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: tryptophan-tRNA ligase activity (GO:0004830), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tryptophanyl-tRNA aminoacylation (GO:0006436))
TRYPTOPHANYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR10055 from=8 to=326 evalue=7.5e-89 interpro_id=IPR002306 interpro_description=Tryptophanyl-tRNA synthetase, class Ib GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: tryptophan-tRNA ligase activity (GO:0004830), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tryptophanyl-tRNA aminoacylation (GO:0006436))
Nucleotidylyl transferase (db=superfamily db_id=SSF52374 from=3 to=328 evalue=5.8e-78)
ACD13_27_25
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(17497..18180)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NG35_9ACTO (db=UNIREF evalue=8.0e-12 bit_score=73.9 identity=28.38 coverage=93.859649122807)
hypothetical protein (db=KEGG evalue=1.0e-09 bit_score=66.6 identity=26.51 coverage=85.0877192982456)
seg (db=Seg db_id=seg from=15 to=28)
Uncharacterized protein {ECO:0000313|EMBL:KKR64689.1}; TaxID=1618553 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_40_43.;"
ACD13_27_26
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(18545..18934)
DNA (390bp) protein (130aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
coiled-coil (db=Coil db_id=coil from=39 to=74 evalue=NA)
DivIC (db=HMMPfam db_id=PF04977 from=24 to=98 evalue=2.4e-16 interpro_id=IPR007060 interpro_description=Septum formation initiator GO=Biological Process: cell cycle (GO:0007049))
Cell division protein FtsL {ECO:0000313|EMBL:KKR58733.1}; TaxID=1618588 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_40_30.;"
ACD13_27_27
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

19059..19922
DNA (864bp) protein (288aa)
hypothetical protein
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=113 to=274 evalue=4.6e-32 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=113 to=274 evalue=2.9e-29 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
Phage_integrase (db=HMMPfam db_id=PF00589 from=113 to=273 evalue=7.6e-25 interpro_id=IPR002104 interpro_description=Integrase, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD13_27_28
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(20053..20895)
DNA (843bp) protein (281aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
UDP-glucose/GDP-mannose dehydrogenase dimerization n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CAP6_SPHTD (db=UNIREF evalue=2.0e-28 bit_score=129.0 identity=38.37 coverage=59.7864768683274)
seg (db=Seg db_id=seg from=2 to=22)
seg (db=Seg db_id=seg from=218 to=230)
ACD13_27_29
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(20984..23317)
DNA (2334bp) protein (778aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS42_9BACT (db=UNIREF evalue=1.0e-161 bit_score=573.0 identity=39.39 coverage=98.3290488431877)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
ACD13_27_30
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(23307..23660)
DNA (354bp) protein (118aa)
23307..23660 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKR58729.1}; TaxID=1618588 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_40_30.;"
Displaying items 1-30 of 96 in total

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