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ACD13_28

Alias: ACD13_34373.21167.21

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD13_28_1

Not on your lists

comp(1..207)
DNA (207bp) protein (69aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
seg (db=Seg db_id=seg from=22 to=41)
Uncharacterized protein {ECO:0000313|EMBL:EKE12636.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_28_2

Not on your lists

comp(197..2632)
DNA (2436bp) protein (812aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=519 to=541)
transmembrane_regions (db=TMHMM db_id=tmhmm from=476 to=498)
seg (db=Seg db_id=seg from=500 to=508)
seg (db=Seg db_id=seg from=448 to=474)
ACD13_28_3

Not on your lists

comp(2635..4350)
DNA (1716bp) protein (572aa)
hypothetical protein
hypothetical protein
coiled-coil (db=Coil db_id=coil from=68 to=89 evalue=NA)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=172 to=561 evalue=1.5e-32)
ACD13_28_4

Not on your lists

comp(4460..5194)
DNA (735bp) protein (245aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRY8_9BACT (db=UNIREF evalue=5.0e-20 bit_score=101.0 identity=31.28 coverage=88.5714285714286)
Uncharacterized protein {ECO:0000313|EMBL:EKE12639.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_28_5

Not on your lists

6227..6418
DNA (192bp) protein (64aa)
6227..6418 + (rbs_motif=TAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE12619.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_28_6

Not on your lists

6485..8740
DNA (2256bp) protein (752aa)
coiled-coil (db=Coil db_id=coil from=467 to=488 evalue=NA)
seg (db=Seg db_id=seg from=365 to=378)
Uncharacterized protein {ECO:0000313|EMBL:EKE12620.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_28_7

Not on your lists

comp(8742..10400)
DNA (1659bp) protein (553aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=296 to=318)
transmembrane_regions (db=TMHMM db_id=tmhmm from=323 to=345)
transmembrane_regions (db=TMHMM db_id=tmhmm from=358 to=380)
transmembrane_regions (db=TMHMM db_id=tmhmm from=390 to=412)
ACD13_28_8

Not on your lists

comp(10400..12829)
DNA (2430bp) protein (810aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=5 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKE12622.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_28_9

Not on your lists

comp(12857..13138)
DNA (282bp) protein (94aa)
seg (db=Seg db_id=seg from=61 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=38)
transmembrane_regions (db=TMHMM db_id=tmhmm from=59 to=81)
Uncharacterized protein {ECO:0000313|EMBL:EKE12623.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_28_10

Not on your lists

comp(13194..13532)
DNA (339bp) protein (113aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=76 to=98)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
seg (db=Seg db_id=seg from=32 to=57)
Uncharacterized protein {ECO:0000313|EMBL:EKE12624.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_28_11

Not on your lists

comp(13541..13861)
DNA (321bp) protein (107aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
transmembrane_regions (db=TMHMM db_id=tmhmm from=68 to=90)
Uncharacterized protein {ECO:0000313|EMBL:EKE12625.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_28_12

Not on your lists

comp(13858..14229)
DNA (372bp) protein (124aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=86 to=108)
transmembrane_regions (db=TMHMM db_id=tmhmm from=43 to=65)
seg (db=Seg db_id=seg from=82 to=94)
Uncharacterized protein {ECO:0000313|EMBL:EKE12626.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_28_13

Not on your lists

comp(14231..14578)
DNA (348bp) protein (116aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=80 to=102)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
seg (db=Seg db_id=seg from=80 to=94)
Uncharacterized protein {ECO:0000313|EMBL:EKE12627.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_28_14

Not on your lists

comp(14580..14885)
DNA (306bp) protein (102aa)
seg (db=Seg db_id=seg from=28 to=57)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
transmembrane_regions (db=TMHMM db_id=tmhmm from=75 to=97)
Uncharacterized protein {ECO:0000313|EMBL:EKE12628.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_28_15

Not on your lists

comp(14936..15295)
DNA (360bp) protein (120aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
transmembrane_regions (db=TMHMM db_id=tmhmm from=83 to=105)
Uncharacterized protein {ECO:0000313|EMBL:EKE12629.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_28_16

Not on your lists

comp(15273..15968)
DNA (696bp) protein (232aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=196 to=218)
transmembrane_regions (db=TMHMM db_id=tmhmm from=157 to=179)
seg (db=Seg db_id=seg from=43 to=51)
seg (db=Seg db_id=seg from=5 to=18)
ACD13_28_17

Not on your lists

16030..17730
DNA (1701bp) protein (567aa)
SpoIID/LytB protein
SpoIID/LytB domain protein n=1 Tax=Selenomonas noxia ATCC 43541 RepID=D4S8L6_9FIRM (db=UNIREF evalue=2.0e-09 bit_score=68.2 identity=41.9 coverage=17.1075837742504)
coiled-coil (db=Coil db_id=coil from=66 to=101 evalue=NA)
coiled-coil (db=Coil db_id=coil from=162 to=183 evalue=NA)
ACD13_28_18

Not on your lists

17746..18375
DNA (630bp) protein (210aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=67 to=86)
transmembrane_regions (db=TMHMM db_id=tmhmm from=101 to=123)
DUF304 (db=HMMPfam db_id=PF03703 from=122 to=199 evalue=1.1e-06 interpro_id=IPR005182 interpro_description=Protein of unknown function DUF304, transmembrane flanked domain, bacterial)
Uncharacterized protein {ECO:0000313|EMBL:EKE12632.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_28_19

Not on your lists

18379..18603
DNA (225bp) protein (75aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=11 to=33)
transmembrane_regions (db=TMHMM db_id=tmhmm from=54 to=73)
Uncharacterized protein {ECO:0000313|EMBL:EKE12633.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_28_20

Not on your lists

18604..20475
DNA (1872bp) protein (624aa)
hypothetical protein (db=KEGG evalue=7.0e-10 bit_score=69.7 identity=22.79 coverage=51.7628205128205)
transmembrane_regions (db=TMHMM db_id=tmhmm from=266 to=286)
seg (db=Seg db_id=seg from=371 to=386)
seg (db=Seg db_id=seg from=87 to=101)
ACD13_28_21

Not on your lists

comp(20928..21206)
DNA (279bp) protein (93aa)
smpB; SsrA-binding protein
Small protein B (SmpB) (db=superfamily db_id=SSF74982 from=1 to=71 evalue=1.2e-12 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412))
Q3Z6E3_DEHE1_Q3Z6E3; (db=BlastProDom db_id=PD004488 from=1 to=71 evalue=6.0e-09 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:2.40.280.10 from=1 to=68 evalue=2.9e-08 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412))
Displaying 21 items

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