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ACD13_29

Alias: ACD13_11237.143636.20

Search features with annotation key words

Displaying items 121-150 of 167 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD13_29_121
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

97610..98689
DNA (1080bp) protein (360aa)
putative integral membrane protein
seg (db=Seg db_id=seg from=137 to=149)
transmembrane_regions (db=TMHMM db_id=tmhmm from=332 to=354)
transmembrane_regions (db=TMHMM db_id=tmhmm from=290 to=312)
ACD13_29_122
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(98686..99750)
DNA (1065bp) protein (355aa)
cell envelope-related transcriptional attenuator
seg (db=Seg db_id=seg from=19 to=33)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
LytR_cpsA_psr (db=HMMPfam db_id=PF03816 from=85 to=262 evalue=1.7e-31 interpro_id=IPR004474 interpro_description=Cell envelope-related transcriptional attenuator)
ACD13_29_123
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

99779..101704
DNA (1926bp) protein (642aa)
hypothetical protein
hypothetical protein
ATP-dependent DNA helicase PcrA n=3 Tax=Geobacillus RepID=C5D4J1_GEOSW (db=UNIREF evalue=2.0e-146 bit_score=523.0 identity=47.09 coverage=94.0809968847352)
seg (db=Seg db_id=seg from=22 to=33)
ACD13_29_124
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

101697..102674
DNA (978bp) protein (326aa)
femAB
seg (db=Seg db_id=seg from=93 to=105)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=119 to=278 evalue=1.0e-41 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=127 to=304 evalue=3.0e-39 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
ACD13_29_125
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

102696..103061
DNA (366bp) protein (122aa)
blue (type 1) copper domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=23)
seg (db=Seg db_id=seg from=29 to=47)
Cupredoxins (db=superfamily db_id=SSF49503 from=21 to=121 evalue=1.8e-22 interpro_id=IPR008972 interpro_description=Cupredoxin)
close to amicyanin (has blue copper protein domain) Jill Banfield (11/15/12)
ACD13_29_126

Not on your lists

103077..103976
DNA (900bp) protein (300aa)
methicillin resistance protein
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=110 to=296 evalue=2.8e-23 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=102 to=279 evalue=1.3e-15 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
FemAB (db=HMMPfam db_id=PF02388 from=218 to=294 evalue=5.8e-09 interpro_id=IPR003447 interpro_description=Methicillin resistance protein GO=Biological Process: peptidoglycan biosynthetic process (GO:0009252))
ACD13_29_127
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

103973..104152
DNA (180bp) protein (60aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
coiled-coil (db=Coil db_id=coil from=4 to=25 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:KKR57038.1}; TaxID=1618588 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_40_30.;"
ACD13_29_128

Not on your lists

comp(104118..104231)
DNA (114bp) protein (38aa)
104118..104231 - (rbs_motif=TAAT rbs_spacer=12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE13469.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_29_129
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

104238..104498
DNA (261bp) protein (87aa)
104238..104498 + (rbs_motif=TAA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:KKR57039.1}; TaxID=1618588 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_40_30.;"
ACD13_29_130
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(104491..104952)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YTE5_9CYAN (db=UNIREF evalue=9.0e-26 bit_score=119.0 identity=38.41 coverage=96.1038961038961)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=50 to=71 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=1 to=150 evalue=1.8e-22 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
NUDIX (db=HMMPfam db_id=PF00293 from=17 to=141 evalue=1.1e-15 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD13_29_131

Not on your lists

comp(104949..107918)
DNA (2970bp) protein (990aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MLR2_9BACT (db=UNIREF evalue=1.0e-176 bit_score=624.0 identity=38.73 coverage=97.1717171717172)
seg (db=Seg db_id=seg from=361 to=376)
ACD13_29_132
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(107915..108916)
DNA (1002bp) protein (334aa)
Putative DNA recombination protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVA7_9BACT (db=UNIREF evalue=4.0e-60 bit_score=235.0 identity=42.42 coverage=88.0239520958084)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=57 to=78 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
ACD13_29_133
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

108951..109286
DNA (336bp) protein (112aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=102)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=64)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=37)
seg (db=Seg db_id=seg from=70 to=98)
ACD13_29_134

Not on your lists

109283..109615
DNA (333bp) protein (111aa)
109283..109615 + (rbs_motif=ATA rbs_spacer=12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE13475.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_29_135
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

109649..111064
DNA (1416bp) protein (472aa)
Methionyl-tRNA synthetase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDU2_THET1 (db=UNIREF evalue=5.0e-110 bit_score=401.0 identity=40.93 coverage=98.9406779661017)
methionyl-tRNA synthetase
methionyl-tRNA synthetase
metG: methionyl-tRNA synthetase (db=HMMTigr db_id=TIGR00398 from=5 to=471 evalue=1.3e-140 interpro_id=IPR002304 interpro_description=Methionyl-tRNA synthetase, class Ia GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: methionine-tRNA ligase activity (GO:0004825), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: methionyl-tRNA aminoacylation (GO:0006431))
ACD13_29_136
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

111075..112565
DNA (1491bp) protein (497aa)
hypothetical protein
Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FDY3_9CHLO (db=UNIREF evalue=3.0e-49 bit_score=199.0 identity=29.67 coverage=81.8913480885312)
seg (db=Seg db_id=seg from=418 to=432)
transmembrane_regions (db=TMHMM db_id=tmhmm from=454 to=476)
ACD13_29_137
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(112586..113530)
DNA (945bp) protein (315aa)
hypothetical protein
hypothetical protein
NAD-dependent epimerase/dehydratase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JJ63_BURP8 (db=UNIREF evalue=1.0e-101 bit_score=372.0 identity=57.1 coverage=96.5079365079365)
DTDP-GLUCOSE 4-6-DEHYDRATASE (db=HMMPanther db_id=PTHR10366:SF35 from=6 to=313 evalue=8.1e-142)
ACD13_29_138
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

113563..115071
DNA (1509bp) protein (503aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=342 to=364)
transmembrane_regions (db=TMHMM db_id=tmhmm from=316 to=335)
transmembrane_regions (db=TMHMM db_id=tmhmm from=294 to=311)
transmembrane_regions (db=TMHMM db_id=tmhmm from=268 to=287)
ACD13_29_139
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

115100..115435
DNA (336bp) protein (112aa)
seg (db=Seg db_id=seg from=16 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=73)
transmembrane_regions (db=TMHMM db_id=tmhmm from=86 to=108)
ACD13_29_140
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

115437..116528
DNA (1092bp) protein (364aa)
glycosyl transferase family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=153 to=172)
transmembrane_regions (db=TMHMM db_id=tmhmm from=182 to=201)
transmembrane_regions (db=TMHMM db_id=tmhmm from=208 to=230)
ACD13_29_141
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

116480..117457
DNA (978bp) protein (326aa)
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=218 to=240)
transmembrane_regions (db=TMHMM db_id=tmhmm from=173 to=190)
transmembrane_regions (db=TMHMM db_id=tmhmm from=147 to=169)
ACD13_29_142
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(117462..118316)
DNA (855bp) protein (285aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=2 to=18)
PEGA (db=HMMPfam db_id=PF08308 from=123 to=190 evalue=7.2e-12 interpro_id=IPR013229 interpro_description=PEGA)
SH3_3 (db=HMMPfam db_id=PF08239 from=218 to=276 evalue=2.3e-06 interpro_id=IPR013247 interpro_description=SH3, type 3)
ACD13_29_143

Not on your lists

118699..119373
DNA (675bp) protein (225aa)
metalloprotease yebA precursor n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018514E6 (db=UNIREF evalue=3.0e-24 bit_score=115.0 identity=49.51 coverage=45.3333333333333)
peptidase M23
Duplicated hybrid motif (db=superfamily db_id=SSF51261 from=119 to=222 evalue=1.9e-37 interpro_id=IPR011055 interpro_description=Duplicated hybrid motif)
PEPTIDASE-RELATED (db=HMMPanther db_id=PTHR21666 from=86 to=222 evalue=1.5e-33)
ACD13_29_144
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(119375..119971)
DNA (597bp) protein (199aa)
DNA-3-methyladenine glycosylase (EC:3.2.2.21)
ALKYLBASE_DNA_GLYCOS (db=PatternScan db_id=PS00516 from=128 to=152 evalue=0.0 interpro_id=IPR000035 interpro_description=Alkylbase DNA glycosidase, conserved site GO=Molecular Function: alkylbase DNA N-glycosylase activity (GO:0003905), Biological Process: DNA repair (GO:0006281))
DNA-glycosylase (db=superfamily db_id=SSF48150 from=22 to=195 evalue=1.6e-34 interpro_id=IPR011257 interpro_description=DNA glycosylase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
no description (db=Gene3D db_id=G3DSA:1.10.340.30 from=35 to=144 evalue=3.1e-22)
ACD13_29_145
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(120016..121635)
DNA (1620bp) protein (540aa)
60 kDa chaperonin 2 n=2 Tax=Roseiflexus RepID=CH602_ROSS1 (db=UNIREF evalue=0.0 bit_score=672.0 identity=61.4 coverage=99.6296296296296)
chaperonin GroEL
chaperonin GroEL
GroEL: chaperonin GroL (db=HMMTigr db_id=TIGR02348 from=2 to=526 evalue=0.0 interpro_id=IPR001844 interpro_description=Chaperonin Cpn60)
ACD13_29_146
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(121662..121958)
DNA (297bp) protein (99aa)
hypothetical protein
no description (db=HMMSmart db_id=SM00883 from=6 to=97 evalue=3.1e-31 interpro_id=IPR001476 interpro_description=Chaperonin Cpn10, subgroup GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
GROES CHAPERONIN (db=HMMPanther db_id=PTHR10772 from=1 to=98 evalue=4.8e-26 interpro_id=IPR001476 interpro_description=Chaperonin Cpn10, subgroup GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
GroES-like (db=superfamily db_id=SSF50129 from=3 to=98 evalue=2.1e-25 interpro_id=IPR011032 interpro_description=GroES-like)
ACD13_29_147
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(122037..122888)
DNA (852bp) protein (284aa)
hypothetical protein
seg (db=Seg db_id=seg from=74 to=87)
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=77 to=144 evalue=9.8e-07)
hypothetical protein alias=ACD13_11237.143636.20G0147,ACD13_11237.143636.20_147,ACD13_C00029G00147 id=6982 tax=ACD13 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi organism_group=OP11 organism_desc=OP11
ACD13_29_148
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(122888..124312)
DNA (1425bp) protein (475aa)
family 1 extracellular solute-binding protein
seg (db=Seg db_id=seg from=29 to=49)
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=67)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=73 to=466 evalue=2.9e-58)
ACD13_29_149

Not on your lists

124361..126145
DNA (1785bp) protein (595aa)
VanW family protein
VanW family protein n=2 Tax=Chloroflexus RepID=A9W9P3_CHLAA (db=UNIREF evalue=4.0e-72 bit_score=276.0 identity=30.18 coverage=91.9327731092437)
seg (db=Seg db_id=seg from=21 to=40)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
ACD13_29_150

Not on your lists

126182..127237
DNA (1056bp) protein (352aa)
Sua5/YciO/YrdC/YwlC family protein
TIGR00057: Sua5/YciO/YrdC/YwlC family pro (db=HMMTigr db_id=TIGR00057 from=1 to=207 evalue=2.2e-52 interpro_id=IPR004388 interpro_description=Sua5/YciO/YrdC/YwlC)
YrdC/RibB (db=superfamily db_id=SSF55821 from=1 to=210 evalue=1.9e-48 interpro_id=IPR017945 interpro_description=DHBP synthase RibB-like alpha/beta domain)
Sua5_yciO_yrdC (db=HMMPfam db_id=PF01300 from=17 to=195 evalue=1.2e-44 interpro_id=IPR006070 interpro_description=Sua5/YciO/YrdC, N-terminal)
Displaying items 121-150 of 167 in total

View Taxonomy