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ACD13_29

Alias: ACD13_11237.143636.20

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Displaying items 1-30 of 167 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD13_29_1

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38..1066
DNA (1029bp) protein (343aa)
YceG family protein
predicted periplasmic solute-binding protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692E58 (db=UNIREF evalue=2.0e-50 bit_score=202.0 identity=37.32 coverage=91.2536443148688)
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=49)
YceG (db=HMMPfam db_id=PF02618 from=64 to=339 evalue=6.9e-82 interpro_id=IPR003770 interpro_description=Uncharacterised protein family YceG-like)
ACD13_29_2

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1186..4557
DNA (3372bp) protein (1124aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
seg (db=Seg db_id=seg from=1076 to=1094)
seg (db=Seg db_id=seg from=611 to=621)
seg (db=Seg db_id=seg from=782 to=793)
ACD13_29_3

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4572..8291
DNA (3720bp) protein (1240aa)
hypothetical protein
hypothetical protein
UPI0001D5CBB4 related cluster n=1 Tax=unknown RepID=UPI0001D5CBB4 (db=UNIREF evalue=0.0 bit_score=1140.0 identity=47.83 coverage=98.4677419354839)
seg (db=Seg db_id=seg from=187 to=197)
ACD13_29_4

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8293..8712
DNA (420bp) protein (140aa)
30S ribosomal protein S12 n=5 Tax=Ruminococcaceae RepID=A8SFM5_9FIRM (db=UNIREF evalue=2.0e-44 bit_score=181.0 identity=64.18 coverage=95.0)
rpsL; 30S ribosomal protein S12
RIBOSOMAL_S12 (db=PatternScan db_id=PS00055 from=56 to=63 evalue=0.0 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsL_bact: ribosomal protein S12 (db=HMMTigr db_id=TIGR00981 from=1 to=137 evalue=6.3e-74 interpro_id=IPR005679 interpro_description=Ribosomal protein S12, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
ACD13_29_5

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8717..9196
DNA (480bp) protein (160aa)
rpsG; 30S ribosomal protein S7
rpsG_bact: ribosomal protein S7 (db=HMMTigr db_id=TIGR01029 from=3 to=159 evalue=3.8e-76 interpro_id=IPR005717 interpro_description=Ribosomal protein S7, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
RIBOSOMAL PROTEIN S7 (db=HMMPanther db_id=PTHR11205 from=1 to=159 evalue=8.6e-53 interpro_id=IPR000235 interpro_description=Ribosomal protein S7 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S7 (db=HMMPfam db_id=PF00177 from=1 to=152 evalue=2.4e-52 interpro_id=IPR000235 interpro_description=Ribosomal protein S7 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD13_29_6

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9285..11453
DNA (2169bp) protein (723aa)
translation elongation factor 2 (EF-2/EF-G)
Translation elongation factor G n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZZ0_THERP (db=UNIREF evalue=0.0 bit_score=811.0 identity=56.55 coverage=95.5739972337483)
seg (db=Seg db_id=seg from=534 to=548)
ACD13_29_7

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11555..12748
DNA (1194bp) protein (398aa)
Elongation factor Tu n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WTX5_ALIAD (db=UNIREF evalue=5.0e-176 bit_score=620.0 identity=74.62 coverage=98.4924623115578)
hypothetical protein
hypothetical protein
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=54 to=69 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
ACD13_29_8

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12784..13092
DNA (309bp) protein (103aa)
rpsJ; 30S ribosomal protein S10
RIBOSOMAL_S10 (db=PatternScan db_id=PS00361 from=29 to=44 evalue=0.0 interpro_id=IPR018268 interpro_description=Ribosomal protein S10, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsJ_bact: ribosomal protein S10 (db=HMMTigr db_id=TIGR01049 from=4 to=102 evalue=1.7e-46 interpro_id=IPR005731 interpro_description=Ribosomal protein S10 subgroup GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
30S RIBOSOMAL PROTEIN S10 (db=HMMPanther db_id=PTHR11700:SF2 from=1 to=102 evalue=2.8e-45 interpro_id=IPR005731 interpro_description=Ribosomal protein S10 subgroup GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
ACD13_29_9

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comp(13107..13979)
DNA (873bp) protein (291aa)
NAD-dependent epimerase/dehydratase family protein/3-beta hydroxysteroid dehydrogenase/isomerase family protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJM1_THEYD (db=UNIREF evalue=3.0e-13 bit_score=79.3 identity=31.2 coverage=74.5704467353952)
NAD-dependent dehydratase
seg (db=Seg db_id=seg from=223 to=235)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=269 evalue=7.4e-34)
ACD13_29_10

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14004..14993
DNA (990bp) protein (330aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=179 to=201)
transmembrane_regions (db=TMHMM db_id=tmhmm from=237 to=259)
transmembrane_regions (db=TMHMM db_id=tmhmm from=266 to=288)
transmembrane_regions (db=TMHMM db_id=tmhmm from=310 to=328)
ACD13_29_11

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15036..15269
DNA (234bp) protein (78aa)
15036..15269 + (rbs_motif=TATTA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE13525.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_29_12

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15392..16216
DNA (825bp) protein (275aa)
rplC; 50S ribosomal protein L3
seg (db=Seg db_id=seg from=68 to=78)
seg (db=Seg db_id=seg from=253 to=274)
L3_bact: 50S ribosomal protein L3 (db=HMMTigr db_id=TIGR03625 from=19 to=222 evalue=4.3e-82 interpro_id=IPR019927 interpro_description=Ribosomal protein L3, bacterial/organelle-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD13_29_13

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16240..16923
DNA (684bp) protein (228aa)
50S ribosomal protein L4
seg (db=Seg db_id=seg from=208 to=227)
seg (db=Seg db_id=seg from=139 to=150)
Ribosomal protein L4 (db=superfamily db_id=SSF52166 from=1 to=199 evalue=7.1e-38 interpro_id=IPR002136 interpro_description=Ribosomal protein L4/L1e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD13_29_14

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16926..17201
DNA (276bp) protein (92aa)
rplW; 50S ribosomal protein L23
RIBOSOMAL_L23 (db=PatternScan db_id=PS00050 from=71 to=86 evalue=0.0 interpro_id=IPR001014 interpro_description=Ribosomal protein L23/L25, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L23 (db=HMMPfam db_id=PF00276 from=3 to=88 evalue=4.2e-18 interpro_id=IPR013025 interpro_description=Ribosomal protein L25/L23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal proteins S24e, L23 and L15e (db=superfamily db_id=SSF54189 from=1 to=88 evalue=1.2e-15 interpro_id=IPR012678 interpro_description=Ribosomal protein L23/L15e, core GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD13_29_15

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17209..17982
DNA (774bp) protein (258aa)
50S ribosomal protein L2
rplB_bact: ribosomal protein L2 (db=HMMTigr db_id=TIGR01171 from=1 to=252 evalue=2.6e-99 interpro_id=IPR005880 interpro_description=Ribosomal protein L2, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934), Molecular Function: transferase activity (GO:0016740))
Ribosomal protein, L2p/L2a/L8e/organellar L2 types (db=HMMPIR db_id=PIRSF002158 from=1 to=251 evalue=1.3e-80 interpro_id=IPR002171 interpro_description=Ribosomal protein L2 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMAL PROTEIN L2 (db=HMMPanther db_id=PTHR13691 from=63 to=250 evalue=1.5e-71 interpro_id=IPR002171 interpro_description=Ribosomal protein L2 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD13_29_16

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17990..18271
DNA (282bp) protein (94aa)
rpsS; 30S ribosomal protein S19
RIBOSOMAL_S19 (db=PatternScan db_id=PS00323 from=52 to=76 evalue=0.0 interpro_id=IPR020934 interpro_description=Ribosomal protein S19 conserved site GO=Molecular Function: RNA binding (GO:0003723))
rpsS_bact: ribosomal protein S19 (db=HMMTigr db_id=TIGR01050 from=1 to=88 evalue=3.5e-49 interpro_id=IPR005732 interpro_description=Ribosomal protein S19, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
RIBOSOMAL PROTEIN S19P FAMILY MEMBER (db=HMMPanther db_id=PTHR11880 from=1 to=88 evalue=2.7e-36 interpro_id=IPR002222 interpro_description=Ribosomal protein S19/S15 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD13_29_17

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18305..18745
DNA (441bp) protein (147aa)
rplV; 50S ribosomal protein L22
seg (db=Seg db_id=seg from=128 to=145)
coiled-coil (db=Coil db_id=coil from=120 to=141 evalue=NA)
Ribosomal_L22 (db=HMMPfam db_id=PF00237 from=7 to=109 evalue=1.3e-26 interpro_id=IPR001063 interpro_description=Ribosomal protein L22/L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD13_29_18

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18785..19438
DNA (654bp) protein (218aa)
ribosomal protein S3P
RIBOSOMAL_S3 (db=PatternScan db_id=PS00548 from=172 to=206 evalue=0.0 interpro_id=IPR018280 interpro_description=Ribosomal protein S3, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsC_bact: ribosomal protein S3 (db=HMMTigr db_id=TIGR01009 from=1 to=217 evalue=2.0e-72 interpro_id=IPR005704 interpro_description=Ribosomal protein S3, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
CHLOROPLAST 30S RIBOSOMAL PROTEIN S3 (db=HMMPanther db_id=PTHR11760:SF10 from=99 to=211 evalue=9.3e-42)
ACD13_29_19

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19455..19868
DNA (414bp) protein (138aa)
rplP; 50S ribosomal protein L16
RIBOSOMAL_L16_1 (db=PatternScan db_id=PS00586 from=59 to=70 evalue=0.0 interpro_id=IPR020798 interpro_description=Ribosomal protein L16, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplP_bact: ribosomal protein L16 (db=HMMTigr db_id=TIGR01164 from=2 to=127 evalue=7.7e-65 interpro_id=IPR000114 interpro_description=Ribosomal protein L16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
50S/60S RIBOSOMAL PROTEIN L16 (db=HMMPanther db_id=PTHR12220 from=1 to=134 evalue=4.5e-52 interpro_id=IPR000114 interpro_description=Ribosomal protein L16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD13_29_20

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19877..20128
DNA (252bp) protein (84aa)
seg (db=Seg db_id=seg from=70 to=81)
coiled-coil (db=Coil db_id=coil from=59 to=80 evalue=NA)
Ribosomal protein L29 (L29p) (db=superfamily db_id=SSF46561 from=4 to=63 evalue=9.2e-08 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L29 (db=HMMPfam db_id=PF00831 from=7 to=63 evalue=7.8e-06 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD13_29_21

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20160..20405
DNA (246bp) protein (82aa)
30S ribosomal protein S17
Ribosomal_S17 (db=HMMPfam db_id=PF00366 from=12 to=72 evalue=4.2e-17 interpro_id=IPR000266 interpro_description=Ribosomal protein S17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER (db=HMMPanther db_id=PTHR10744 from=1 to=72 evalue=1.2e-16 interpro_id=IPR000266 interpro_description=Ribosomal protein S17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S17 (db=HMMPanther db_id=PTHR10744:SF1 from=1 to=72 evalue=1.2e-16)
ACD13_29_22

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20402..20767
DNA (366bp) protein (122aa)
hypothetical protein
rplN_bact: ribosomal protein L14 (db=HMMTigr db_id=TIGR01067 from=1 to=121 evalue=1.6e-52 interpro_id=IPR005745 interpro_description=Ribosomal protein L14, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
50S/60S RIBOSOMAL PROTEIN L14/L23 (db=HMMPanther db_id=PTHR11761 from=1 to=121 evalue=2.3e-46 interpro_id=IPR000218 interpro_description=Ribosomal protein L14b/L23e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S RIBOSOMAL PROTEIN L14 (db=HMMPanther db_id=PTHR11761:SF3 from=1 to=121 evalue=2.3e-46 interpro_id=IPR005745 interpro_description=Ribosomal protein L14, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
ACD13_29_23

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20773..21087
DNA (315bp) protein (105aa)
rplX; 50S ribosomal protein L24
rplX_bact: ribosomal protein L24 (db=HMMTigr db_id=TIGR01079 from=1 to=101 evalue=1.8e-30 interpro_id=IPR003256 interpro_description=Ribosomal protein L24 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Translation proteins SH3-like domain (db=superfamily db_id=SSF50104 from=3 to=100 evalue=7.4e-26 interpro_id=IPR008991 interpro_description=Translation protein SH3-like)
MITOCHONDRIAL RIBOSOMAL PROTEIN L24 (db=HMMPanther db_id=PTHR12903 from=2 to=102 evalue=5.8e-24 interpro_id=IPR003256 interpro_description=Ribosomal protein L24 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD13_29_24

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21084..21638
DNA (555bp) protein (185aa)
rplE; 50S ribosomal protein L5
50S RIBOSOMAL PROTEIN L5 (db=HMMPanther db_id=PTHR11994:SF4 from=1 to=184 evalue=6.1e-78)
60S RIBOSOMAL PROTEIN L11-RELATED (db=HMMPanther db_id=PTHR11994 from=1 to=184 evalue=6.1e-78 interpro_id=IPR002132 interpro_description=Ribosomal protein L5 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein, L5p/L5a/L11e/organellar L5 types (db=HMMPIR db_id=PIRSF002161 from=1 to=184 evalue=3.0e-68 interpro_id=IPR002132 interpro_description=Ribosomal protein L5 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD13_29_25

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21635..21820
DNA (186bp) protein (62aa)
30S ribosomal protein S14
30S RIBOSOMAL PROTEIN S14 (db=HMMPanther db_id=PTHR19836 from=15 to=61 evalue=5.5e-28 interpro_id=IPR001209 interpro_description=Ribosomal protein S14 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S14 (db=HMMPfam db_id=PF00253 from=8 to=60 evalue=3.3e-24 interpro_id=IPR001209 interpro_description=Ribosomal protein S14 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=2 to=61 evalue=3.2e-21)
ACD13_29_26

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21830..22231
DNA (402bp) protein (134aa)
30S ribosomal protein S8
Ribosomal_S8 (db=HMMPfam db_id=PF00410 from=14 to=132 evalue=4.3e-25 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein S8 (db=superfamily db_id=SSF56047 from=11 to=133 evalue=2.3e-23 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S8 (db=HMMPanther db_id=PTHR11758 from=9 to=133 evalue=1.1e-12 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD13_29_27

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22243..22797
DNA (555bp) protein (185aa)
50S ribosomal protein L6
seg (db=Seg db_id=seg from=171 to=184)
RIBOSOMAL_L6_1 (db=PatternScan db_id=PS00525 from=153 to=161 evalue=0.0 interpro_id=IPR002358 interpro_description=Ribosomal protein L6, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L6_bact: ribosomal protein L6 (db=HMMTigr db_id=TIGR03654 from=2 to=175 evalue=4.4e-91 interpro_id=IPR019906 interpro_description=Ribosomal protein L6, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD13_29_28

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22809..23168
DNA (360bp) protein (120aa)
50S ribosomal protein L18
seg (db=Seg db_id=seg from=81 to=91)
coiled-coil (db=Coil db_id=coil from=1 to=22 evalue=NA)
L18_bact: ribosomal protein L18 (db=HMMTigr db_id=TIGR00060 from=7 to=119 evalue=5.8e-42 interpro_id=IPR004389 interpro_description=Ribosomal protein L18, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD13_29_29

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23173..23667
DNA (495bp) protein (165aa)
30S ribosomal protein S5
seg (db=Seg db_id=seg from=45 to=62)
seg (db=Seg db_id=seg from=106 to=118)
rpsE_bact: ribosomal protein S5 (db=HMMTigr db_id=TIGR01021 from=16 to=161 evalue=1.8e-57 interpro_id=IPR005712 interpro_description=Ribosomal protein S5, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
ACD13_29_30

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23664..23945
DNA (282bp) protein (94aa)
seg (db=Seg db_id=seg from=82 to=93)
Uncharacterized protein {ECO:0000313|EMBL:EKE13544.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 1-30 of 167 in total

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