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ACD13_35

Alias: ACD13_199047.3773.7

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD13_35_1

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comp(18..521)
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC7_9BACT (db=UNIREF evalue=8.0e-12 bit_score=72.8 identity=31.58 coverage=77.3809523809524)
seg (db=Seg db_id=seg from=5 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKE13178.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_35_2
RIFOXYD1_FULL_WWE3_43_17_curated, WWE3, Bacteria

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586..1716
DNA (1131bp) protein (377aa)
hypothetical protein
Putative glycosyltransferase n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC6_9BACT (db=UNIREF evalue=3.0e-115 bit_score=418.0 identity=54.35 coverage=98.9389920424403)
coiled-coil (db=Coil db_id=coil from=320 to=341 evalue=NA)
ACD13_35_3
GWB2_WWE3_43_22_part, WWE3, Bacteria

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1709..2536
DNA (828bp) protein (276aa)
Formamidopyrimidine-DNA glycosylase Fapy-DNA glycosylase
Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(Apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC5_9BACT (db=UNIREF evalue=4.0e-70 bit_score=268.0 identity=49.09 coverage=98.1884057971015)
ZF_FPG_1 (db=PatternScan db_id=PS01242 from=246 to=270 evalue=0.0 interpro_id=IPR015887 interpro_description=DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-(apurinic or apyrimidinic site) lyase activity (GO:0003906), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity, hydrolyzing N-glycosyl compounds (GO:0016799))
fpg: formamidopyrimidine-DNA glycosylase (db=HMMTigr db_id=TIGR00577 from=1 to=270 evalue=3.3e-82 interpro_id=IPR000191 interpro_description=DNA glycosylase/AP lyase GO=Molecular Function: DNA-(apurinic or apyrimidinic site) lyase activity (GO:0003906), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: oxidized purine base lesion DNA N-glycosylase activity (GO:0008534))
ACD13_35_4

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2533..3597
DNA (1065bp) protein (355aa)
DNA replication and repair protein RecF
DNA replication and repair protein recF n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC4_9BACT (db=UNIREF evalue=4.0e-100 bit_score=368.0 identity=52.79 coverage=95.7746478873239)
RECF_2 (db=PatternScan db_id=PS00618 from=304 to=322 evalue=0.0 interpro_id=IPR018078 interpro_description=DNA-binding, RecF, conserved site GO=Molecular Function: single-stranded DNA binding (GO:0003697), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
ACD13_35_5
GWB2_WWE3_43_22_part, WWE3, Bacteria

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3627..3806
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC3_9BACT (db=UNIREF evalue=4.0e-08 bit_score=60.5 identity=44.64 coverage=91.6666666666667)
Uncharacterized protein {ECO:0000313|EMBL:KKT10974.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
hypothetical protein
Displaying 5 items

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