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ACD13_44

Alias: ACD13_36473.27246.22

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD13_44_1

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256..567
DNA (312bp) protein (104aa)
hypothetical protein
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=7 to=101 evalue=1.3e-20)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=3 to=101 evalue=5.1e-18 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
no description (db=HMMSmart db_id=SM00418 from=17 to=95 evalue=8.7e-18 interpro_id=IPR001845 interpro_description=HTH transcriptional regulator, ArsR GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD13_44_2

Not on your lists

564..824
DNA (261bp) protein (87aa)
glutaredoxin
Thioredoxin-like (db=superfamily db_id=SSF52833 from=4 to=83 evalue=4.8e-14 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
no description (db=Gene3D db_id=G3DSA:3.40.30.10 from=4 to=81 evalue=7.9e-11 interpro_id=IPR012335 interpro_description=Thioredoxin fold)
Glutaredoxin (db=HMMPfam db_id=PF00462 from=6 to=59 evalue=4.7e-10 interpro_id=IPR002109 interpro_description=Glutaredoxin GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: protein disulfide oxidoreductase activity (GO:0015035), Biological Process: cell redox homeostasis (GO:0045454))
ACD13_44_3

Not on your lists

867..1085
DNA (219bp) protein (73aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=48 to=70)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
Uncharacterized protein {ECO:0000313|EMBL:EKE12585.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD13_44_4

Not on your lists

1132..1806
DNA (675bp) protein (225aa)
gspG; general secretion pathway protein G
seg (db=Seg db_id=seg from=154 to=169)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=6 to=26 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
ACD13_44_5

Not on your lists

1864..3393
DNA (1530bp) protein (510aa)
Mg chelatase, subunit ChlI n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8J7_SPHTD (db=UNIREF evalue=3.0e-165 bit_score=585.0 identity=54.92 coverage=98.4313725490196)
Mg chelatase-like protein
Mg chelatase-like protein
TIGR00368: Mg chelatase-like protein (db=HMMTigr db_id=TIGR00368 from=5 to=504 evalue=1.6e-229 interpro_id=IPR004482 interpro_description=Mg chelatase-related protein)
ACD13_44_6

Not on your lists

3412..3855
DNA (444bp) protein (148aa)
D-tyrosyl-tRNA(Tyr) deacylase
D-TYROSYL-TRNA(TYR) DEACYLASE (db=HMMPanther db_id=PTHR10472 from=1 to=147 evalue=9.2e-53 interpro_id=IPR003732 interpro_description=D-tyrosyl-tRNA(Tyr) deacylase GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788), Biological Process: D-amino acid catabolic process (GO:0019478))
D-TYROSYL-TRNA(TYR) DEACYLASE (db=HMMPanther db_id=PTHR10472:SF4 from=1 to=147 evalue=9.2e-53)
DTD-like (db=superfamily db_id=SSF69500 from=1 to=147 evalue=2.3e-48 interpro_id=IPR003732 interpro_description=D-tyrosyl-tRNA(Tyr) deacylase GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788), Biological Process: D-amino acid catabolic process (GO:0019478))
ACD13_44_7

Not on your lists

comp(3847..4446)
DNA (600bp) protein (200aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URN4_9AQUI (db=UNIREF evalue=2.0e-43 bit_score=178.0 identity=44.74 coverage=91.5)
seg (db=Seg db_id=seg from=187 to=198)
A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III (db=HMMPanther db_id=PTHR10359 from=19 to=183 evalue=1.5e-61)
ACD13_44_8

Not on your lists

comp(4712..4993)
DNA (282bp) protein (94aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
Uncharacterized protein {ECO:0000313|EMBL:EKE12590.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_44_9

Not on your lists

5129..5587
DNA (459bp) protein (153aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
hypothetical protein alias=ACD13_36473.27246.22G0009,ACD13_36473.27246.22_9,ACD13_C00044G00009 id=7240 tax=ACD13 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKE12591.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_44_10

Not on your lists

5670..6911
DNA (1242bp) protein (414aa)
PEGA domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
seg (db=Seg db_id=seg from=197 to=210)
DUF3048 (db=HMMPfam db_id=PF11258 from=234 to=402 evalue=1.5e-28 interpro_id=IPR021416 interpro_description=Protein of unknown function DUF3048)
ACD13_44_11

Not on your lists

6941..7525
DNA (585bp) protein (195aa)
Transcriptional regulator
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9G3_9ARCH (db=UNIREF evalue=1.0e-23 bit_score=112.0 identity=37.57 coverage=95.3846153846154)
seg (db=Seg db_id=seg from=160 to=171)
coiled-coil (db=Coil db_id=coil from=34 to=55 evalue=NA)
ACD13_44_12

Not on your lists

7529..8872
DNA (1344bp) protein (448aa)
hypothetical protein
Translocase subunit secD n=5 Tax=Fusobacterium RepID=C3WK65_9FUSO (db=UNIREF evalue=4.0e-72 bit_score=275.0 identity=43.88 coverage=82.3660714285714)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=351 to=363)
ACD13_44_13

Not on your lists

8869..9687
DNA (819bp) protein (273aa)
Protein translocase subunit SecF
transmembrane_regions (db=TMHMM db_id=tmhmm from=232 to=254)
transmembrane_regions (db=TMHMM db_id=tmhmm from=205 to=227)
transmembrane_regions (db=TMHMM db_id=tmhmm from=155 to=177)
ACD13_44_14

Not on your lists

comp(9684..11024)
DNA (1341bp) protein (447aa)
polyA polymerase family protein
polyA polymerase family protein
coiled-coil (db=Coil db_id=coil from=369 to=390 evalue=NA)
seg (db=Seg db_id=seg from=424 to=436)
ACD13_44_15

Not on your lists

11094..12743
DNA (1650bp) protein (550aa)
single-stranded-DNA-specific exonuclease RecJ
single-stranded-DNA-specific exonuclease RecJ
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B300_HERA2 (db=UNIREF evalue=8.0e-86 bit_score=321.0 identity=32.28 coverage=99.2727272727273)
coiled-coil (db=Coil db_id=coil from=50 to=71 evalue=NA)
ACD13_44_16

Not on your lists

comp(12721..12981)
DNA (261bp) protein (87aa)
12721..12981 - (rbs_motif=ATA rbs_spacer=6bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE12598.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_44_17

Not on your lists


13064..14377
DNA (1314bp) protein (438aa)
aspartyl-tRNA synthetase
aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase n=1 Tax=Frankia sp. EAN1pec RepID=A8LBC0_FRASN (db=UNIREF evalue=6.0e-96 bit_score=355.0 identity=42.47 coverage=98.1735159817352)
seg (db=Seg db_id=seg from=107 to=118)
ACD13_44_18

Not on your lists

14416..15339
DNA (924bp) protein (308aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
no description (db=Gene3D db_id=G3DSA:3.40.710.10 from=49 to=288 evalue=2.2e-66)
beta-lactamase/transpeptidase-like (db=superfamily db_id=SSF56601 from=54 to=291 evalue=1.3e-58 interpro_id=IPR012338 interpro_description=Beta-lactamase-type transpeptidase fold)
D-ALANYL-D-ALANINE CARBOXYPEPTIDASE (db=HMMPanther db_id=PTHR21581 from=52 to=298 evalue=5.0e-56)
ACD13_44_19

Not on your lists

comp(15311..16366)
DNA (1056bp) protein (352aa)
seg (db=Seg db_id=seg from=2 to=15)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
Uncharacterized protein {ECO:0000313|EMBL:EKE12601.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_44_20

Not on your lists

16462..17808
DNA (1347bp) protein (449aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SL45_9FIRM (db=UNIREF evalue=1.0e-75 bit_score=287.0 identity=37.89 coverage=97.9955456570156)
seg (db=Seg db_id=seg from=383 to=397)
GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR10119 from=8 to=448 evalue=9.8e-129 interpro_id=IPR000924 interpro_description=Glutamyl/glutaminyl-tRNA synthetase, class Ic GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Molecular Function: ligase activity, forming aminoacyl-tRNA and related compounds (GO:0016876), Biological Process: tRNA aminoacylatio
ACD13_44_21

Not on your lists

17834..18781
DNA (948bp) protein (316aa)
seg (db=Seg db_id=seg from=237 to=257)
seg (db=Seg db_id=seg from=67 to=79)
Uncharacterized protein {ECO:0000313|EMBL:EKE12603.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_44_22

Not on your lists

18786..19148
DNA (363bp) protein (121aa)
18786..19148 + (rbs_motif=ATAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE12604.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_44_23

Not on your lists

19154..19495
DNA (342bp) protein (114aa)
seg (db=Seg db_id=seg from=91 to=106)
Uncharacterized protein {ECO:0000313|EMBL:EKE12605.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_44_24

Not on your lists

19464..20537
DNA (1074bp) protein (358aa)
efflux transporter, rnd family, mfp subunit
seg (db=Seg db_id=seg from=333 to=346)
seg (db=Seg db_id=seg from=31 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=53)
ACD13_44_25

Not on your lists

20503..21207
DNA (705bp) protein (235aa)
ABC transporter ATP-binding protein
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=152 to=166 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF32 from=11 to=232 evalue=5.6e-107)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=11 to=232 evalue=5.6e-107)
ACD13_44_26

Not on your lists

21200..22402
DNA (1203bp) protein (401aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY91_9BACT (db=UNIREF evalue=1.0e-56 bit_score=224.0 identity=36.76 coverage=98.5037406483791)
transmembrane_regions (db=TMHMM db_id=tmhmm from=360 to=382)
transmembrane_regions (db=TMHMM db_id=tmhmm from=331 to=353)
ACD13_44_27

Not on your lists

22421..23266
DNA (846bp) protein (282aa)
pyrimidine reductase
coiled-coil (db=Coil db_id=coil from=1 to=22 evalue=NA)
Dihydrofolate reductase-like (db=superfamily db_id=SSF53597 from=27 to=260 evalue=1.9e-17)
RibD_C (db=HMMPfam db_id=PF01872 from=64 to=222 evalue=1.0e-06 interpro_id=IPR002734 interpro_description=Bacterial bifunctional deaminase-reductase, C-terminal GO=Molecular Function: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity (GO:0008703), Biological Process: riboflavin biosynthetic process (GO:0009231))
ACD13_44_28
ACD13, ACD13, ACD13, ACD13, Microgenomates, Bacteria

Not on your lists

23323..23445
DNA (123bp) protein (41aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD13_44_29
ACD13, ACD13, ACD13, ACD13, Microgenomates, Bacteria

Not on your lists

23468..23608
DNA (141bp) protein (47aa)
seg (db=Seg db_id=seg from=27 to=36)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=22)
ACD13_44_30

Not on your lists

23629..24381
DNA (753bp) protein (251aa)
hypothetical protein
Dipeptidylaminopeptidase/acylaminoacyl-peptidase n=1 Tax=Meiothermus ruber DSM 1279 RepID=D3PLW0_MEIRD (db=UNIREF evalue=1.0e-59 bit_score=233.0 identity=45.6 coverage=96.8127490039841)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=9 to=250 evalue=9.9e-46)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=1 to=249 evalue=1.9e-29)
Displaying items 1-30 of 33 in total

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