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07M_4_2014_scaffold_5515

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_5515_1
Parcubacteria bacterium GW2011_GWE2_40_8, Parcubacteria, Bacteria

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105..503
DNA (399bp) protein (133aa)
50S ribosomal protein L9 {ECO:0000313|EMBL:KKR76589.1}; TaxID=1618951 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_40_8.;"
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 id=5803507 bin=OD1_GWC2_34_28 species=Thermosipho africanus genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
LSU ribosomal protein L9P
07M_4_2014_scaffold_5515_2
RBG_13_RIF_OD1_08_41_18_curated, RIF-OD1-8, Parcubacteria, Bacteria

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509..2170
DNA (1662bp) protein (554aa)
pho:PH1792 pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] id=2764 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i rbh
CTP synthase
Tax=RBG_13_RIF_OD1_08_41_18_curated
07M_4_2014_scaffold_5515_3
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

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comp(2151..2429)
DNA (279bp) protein (93aa)
50S ribosomal protein L25; K02899 large subunit ribosomal protein L27 id=5803508 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L27
Tax=CG_Nomura_04
07M_4_2014_scaffold_5515_4
R_OD1_42_9, Parcubacteria, Bacteria

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2439..2810
DNA (372bp) protein (124aa)
transmembrane_regions id=5803509 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
07M_4_2014_scaffold_5515_5
GWE2_OD1_38_254, Falkowbacteria, Parcubacteria, Bacteria

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2971..3654
DNA (684bp) protein (228aa)
Orotate phosphoribosyltransferase/orotidine 5''-phosphate decarboxylase, subfamily 1 id=1827474 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Orotate phosphoribosyltransferase/orotidine 5''-phosphate decarboxylase, subfamily 1 {ECO:0000313|EMBL:KKQ64463.1}; TaxID=1618639 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWE2_38_254.;"
orotate phosphoribosyltransferase
07M_4_2014_scaffold_5515_6
R_OD1_41_19, Parcubacteria, Bacteria

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comp(3704..4933)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EQG6_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
07M_4_2014_scaffold_5515_7
RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated, Campbellbacteria, Parcubacteria, Bacteria

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comp(4962..5264)
DNA (303bp) protein (101aa)
transmembrane_regions id=5803515 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated
07M_4_2014_scaffold_5515_8

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comp(5275..5880)
DNA (606bp) protein (202aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] id=5803517 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
gltX; Glutamate-tRNA ligase (EC:6.1.1.17)
Glutamate-tRNA ligase {ECO:0000313|EMBL:KKR47638.1}; TaxID=1618815 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_143.;"
Displaying 8 items

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