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bjp_ig2599_scaffold_1942

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_1942_1
unknown

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1..96
DNA (96bp) protein (32aa)

This feature has no annotations

bjp_ig2599_scaffold_1942_2
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(190..1155)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000362DC1B rbh
putative CHAP domain containing protein Tax=CG_CPR10_01
hypothetical protein
bjp_ig2599_scaffold_1942_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1222..1668)
DNA (447bp) protein (149aa)
nucleic acid-binding protein id=14425396 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
nucleic acid-binding protein Tax=CSP1_2_Dadabacteria
nucleic acid-binding protein
bjp_ig2599_scaffold_1942_4
unknown

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comp(1655..1915)
DNA (261bp) protein (87aa)

This feature has no annotations

bjp_ig2599_scaffold_1942_5
unknown

Not on your lists

comp(2038..3363)
DNA (1326bp) protein (442aa)

This feature has no annotations

bjp_ig2599_scaffold_1942_6
R_RIF_OD1_06_37_25b, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


3520..3999
DNA (480bp) protein (160aa)
dimethyladenosine transferase (EC:2.1.1.48); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_37_25b_curated
dimethyladenosine transferase (EC:2.1.1.48)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000373E318
bjp_ig2599_scaffold_1942_7
GWB1_OD1_50_10, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

4426..4785
DNA (360bp) protein (120aa)
Putative uncharacterized protein Tax=GWB1_OD1_50_10
Putative uncharacterized protein id=4783249 bin=GWC2_OD1_43_27 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
bjp_ig2599_scaffold_1942_8
unknown

Not on your lists

4913..5560
DNA (648bp) protein (216aa)

This feature has no annotations

bjp_ig2599_scaffold_1942_9
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

5633..6004
DNA (372bp) protein (124aa)
hypothetical protein Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
S23 ribosomal protein id=5803193 bin=OD1_GWC2_34_28 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
bjp_ig2599_scaffold_1942_10
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

6088..7338
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037F6782
Ig family protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
bjp_ig2599_scaffold_1942_11
Parcubacteria bacterium GW2011_GWB1_43_6, Parcubacteria, Bacteria

Not on your lists

7342..11256
DNA (3915bp) protein (1305aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI00037AEA24
Uncharacterized protein {ECO:0000313|EMBL:KKT17494.1}; TaxID=1618872 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_6.;"
hypothetical protein; K14836 nucleolar protein 8
bjp_ig2599_scaffold_1942_12
R_OD1_Uhrbacteria_49_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

11466..11915
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_49_11_curated
seg 131..152 id=86374 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
bjp_ig2599_scaffold_1942_13
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

12112..12405
DNA (294bp) protein (98aa)
DNA polymerase beta domain protein region n=4 Tax=Hydrogenobaculum RepID=M1RKZ4_9AQUI
DNA polymerase beta domain-containing protein; K07075 Tax=RBG_16_Chloroflexi_57_8_curated
putative nucleotidyltransferase
bjp_ig2599_scaffold_1942_14
Thermosipho melanesiensis, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

12402..12749
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=A6LNN5_THEM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR31536.1}; TaxID=391009 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.;" source="Thermosipho melanesiensis (strain BI429 /
bjp_ig2599_scaffold_1942_15
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

12801..13139
DNA (339bp) protein (113aa)
DNA polymerase beta domain-containing protein Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
DNA polymerase beta domain protein region id=1744080 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
DNA polymerase beta domain-containing protein
bjp_ig2599_scaffold_1942_16
R_OD1_Falkowbacteria_39_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

13126..13527
DNA (402bp) protein (134aa)
HEPN domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_13_curated
HEPN domain protein id=1744078 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
HEPN domain-containing protein
bjp_ig2599_scaffold_1942_17
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

13545..13961
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003763233
hypothetical protein Tax=CG_CPR10_03
bjp_ig2599_scaffold_1942_18
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

14027..14440
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000377A4AF
hypothetical protein Tax=RBG_13_RIF_OD1_07_36_15_curated
bjp_ig2599_scaffold_1942_19

Not on your lists

14480..15139
DNA (660bp) protein (220aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN97130.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=2966228 bin=GWA1_ZB2_49_26 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
bjp_ig2599_scaffold_1942_20
R_RIF_OD1_07_41_9, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

15157..16944
DNA (1788bp) protein (596aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000374ED57
Type IV secretory pathway VirB4 components-like protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_41_9_curated
Type IV secretory pathway VirB4 component-like protein
bjp_ig2599_scaffold_1942_21

Not on your lists

comp(16973..17500)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000360E79C
Marine sediment metagenome DNA, contig: S06H3_L07416 {ECO:0000313|EMBL:GAI12218.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
conserved protein, JAG-family
bjp_ig2599_scaffold_1942_22
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

comp(17484..18248)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036FDF62
preprotein translocase subunit YidC Tax=CG_CPR10_03
preprotein translocase subunit YidC
bjp_ig2599_scaffold_1942_23
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(18509..18880)
DNA (372bp) protein (124aa)
rnpA; ribonuclease P; K03536 ribonuclease P protein component [EC:3.1.26.5] Tax=CG_CPR10_01
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000378939C
ribonuclease P protein component
bjp_ig2599_scaffold_1942_24
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

19318..20769
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037E6C2A
dnaA; chromosomal replication initiator protein DnaA Tax=CG_CPR10_01
chromosomal replication initiation protein
bjp_ig2599_scaffold_1942_25

Not on your lists

20947..22074
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036F9BFD
Polymerase III subunit beta protein {ECO:0000313|EMBL:KKQ96935.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
DNA polymerase III subunit beta
bjp_ig2599_scaffold_1942_26
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(22175..24376)
DNA (2202bp) protein (734aa)
1A family penicillin-binding protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
Penicillin-binding protein, 1A family id=2966203 bin=GWA1_ZB2_49_26 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
bjp_ig2599_scaffold_1942_27
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

24596..25774
DNA (1179bp) protein (393aa)
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=RBG_13_RIF_OD1_07_42_11_curated
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase id=2966198 bin=GWA1_ZB2_49_26 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good rbh
bjp_ig2599_scaffold_1942_28
unknown

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comp(25812..25955)
DNA (144bp) protein (48aa)

This feature has no annotations

bjp_ig2599_scaffold_1942_29
CG_CPR10_01, CG_CPR10, Bacteria

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comp(26239..26676)
DNA (438bp) protein (146aa)
Tax=CG_CPR10_01
bjp_ig2599_scaffold_1942_30

Not on your lists

comp(26700..27497)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003661309
Marine sediment metagenome DNA, contig: S06H3_C00248 {ECO:0000313|EMBL:GAH95695.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Transcriptional regulator
Displaying items 1-30 of 36 in total

View Taxonomy