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bjp_ig2599_scaffold_4404

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_4404_1
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(52..711)
DNA (660bp) protein (220aa)
homoserine kinase (EC:2.7.1.39); K02204 homoserine kinase type II [EC:2.7.1.39] Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
Homoserine kinase n=1 Tax=Liberibacter solanacearum (strain CLso-ZC1) RepID=E4UCC8_LIBSC
homoserine kinase
bjp_ig2599_scaffold_4404_2
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(3286..3675)
DNA (390bp) protein (130aa)
Putative uncharacterized protein Tax=GWB1_OD1_43_8
id=5227330 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
bjp_ig2599_scaffold_4404_3
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

comp(3706..4011)
DNA (306bp) protein (102aa)
DNA polymerase beta protein n=1 Tax=uncultured bacterium RepID=K2BXU9_9BACT
Polymerase beta domain protein region protein {ECO:0000313|EMBL:KKS15996.1}; TaxID=1618869 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_6.;"
DNA polymerase beta domain-containing protein
bjp_ig2599_scaffold_4404_4
unknown

Not on your lists

comp(4059..4301)
DNA (243bp) protein (81aa)

This feature has no annotations

bjp_ig2599_scaffold_4404_5
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

4486..5886
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036E7BB8
glycosyl transferase family protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
hypothetical protein
bjp_ig2599_scaffold_4404_6
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

6009..7844
DNA (1836bp) protein (612aa)
glycosyl transferase family protein Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
Tetratricopeptide repeat protein id=3012775 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation rbh
glycosyl transferase family protein
bjp_ig2599_scaffold_4404_7
R_RIF_OD1_12_45_11c, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(7848..8378)
DNA (531bp) protein (177aa)
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_12_45_11c_curated
bjp_ig2599_scaffold_4404_8
GWC1_OD1_36_9, Parcubacteria, Bacteria

Not on your lists

comp(8427..9464)
DNA (1038bp) protein (346aa)
Capsule synthesis protein, CapA n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVM1_9BACT
Capsule biosynthesis protein CapA {ECO:0000313|EMBL:KKQ21498.1}; TaxID=1618895 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_36_9.;"
capsule synthesis protein, CapA
bjp_ig2599_scaffold_4404_9
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(9461..10291)
DNA (831bp) protein (277aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT20789.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
id=3012706 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
bjp_ig2599_scaffold_4404_10
unknown

Not on your lists

comp(10327..10629)
DNA (303bp) protein (101aa)

This feature has no annotations

bjp_ig2599_scaffold_4404_11
R_OD1_Yanofskybacteria_43_10b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

10763..11770
DNA (1008bp) protein (336aa)
Integrase catalytic subunit n=1 Tax=uncultured bacterium RepID=K1XEN5_9BACT rbh
transposase Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_43_10b_curated
transposase
bjp_ig2599_scaffold_4404_12
GWA1_OD1_40_21, Parcubacteria, Bacteria

Not on your lists

comp(11864..12304)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003644974
Repressor in ring oxydation complex/ phenylacetic acid degradation pathway related protein (PaaX) Tax=GWA1_OD1_40_21
bjp_ig2599_scaffold_4404_13
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

comp(12405..13667)
DNA (1263bp) protein (421aa)
seryl-tRNA synthetase (EC:6.1.1.11) Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
serS; seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=5803449 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
seryl-tRNA synthetase (EC:6.1.1.11)
bjp_ig2599_scaffold_4404_14
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

13719..14555
DNA (837bp) protein (279aa)
transcriptional regulator, MarR family; K04096 DNA processing protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
UPI0001E2C255 related cluster id=5227209 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
putative DNA processing protein
bjp_ig2599_scaffold_4404_15
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(14630..15229)
DNA (600bp) protein (200aa)
Transcriptional regulator, PaaX family {ECO:0000313|EMBL:KKT20792.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
Transcriptional regulator, PaaX family id=4948078 bin=GWC2_OD1_43_27 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
bjp_ig2599_scaffold_4404_16
Parcubacteria bacterium GW2011_GWD2_40_9, Parcubacteria, Bacteria

Not on your lists

15437..17488
DNA (2052bp) protein (684aa)
DNA topoisomerase I (EC:5.99.1.2)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037E87B7
Topoisomerase protein {ECO:0000313|EMBL:KKR81209.1}; TaxID=1618943 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_40_9.;"
bjp_ig2599_scaffold_4404_17
unknown

Not on your lists

comp(17485..17676)
DNA (192bp) protein (64aa)

This feature has no annotations

bjp_ig2599_scaffold_4404_18
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

17819..19279
DNA (1461bp) protein (487aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA id=2824562 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
bjp_ig2599_scaffold_4404_19
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

comp(19272..20186)
DNA (915bp) protein (305aa)
parB-like partition protein; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
ParB-like partition protein id=4649182 bin=GWA2_OP3_52_12 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors rbh
stage 0 sporulation protein J
Displaying 19 items

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