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bjp_ig2599_scaffold_3146

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_3146_1
CG_CPR03_03, CG_CPR03, Bacteria

Not on your lists

86..364
DNA (279bp) protein (93aa)
id=2824198 Tax=CG_CPR03_03
id=2824198 bin=GWC1_OD1_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
bjp_ig2599_scaffold_3146_2
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(480..995)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037BC507
AMMECR1 domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
AMMECR1 domain-containing protein
bjp_ig2599_scaffold_3146_3
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(988..1599)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036A3968
hypothetical protein Tax=CG_CPR10_01
hypothetical protein
bjp_ig2599_scaffold_3146_4
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1592..2629)
DNA (1038bp) protein (346aa)
Radical SAM domain-containing protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036C8857
Radical SAM domain-containing protein
bjp_ig2599_scaffold_3146_5
RBG_13_RIF_OD1_08_41_18_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

2701..3513
DNA (813bp) protein (271aa)
miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC:2.-.-.-)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036134A3
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=RBG_13_RIF_OD1_08_41_18_curated
bjp_ig2599_scaffold_3146_6

Not on your lists

3510..4340
DNA (831bp) protein (277aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000313|EMBL:KKR47057.1}; TaxID=1618815 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_143.;"
tRNA delta(2)-isopentenylpyrophosphate transferase id=3152155 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
bjp_ig2599_scaffold_3146_trna_3
unknown

Not on your lists

comp(4281..4351)
DNA (71bp)
transferRNA
bjp_ig2599_scaffold_3146_trna_2
unknown

Not on your lists

comp(4663..4747)
DNA (85bp)
transferRNA
bjp_ig2599_scaffold_3146_7
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(4747..7425)
DNA (2679bp) protein (893aa)
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
id=5227216 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
ATP-dependent chaperone ClpB
bjp_ig2599_scaffold_3146_8
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

comp(7438..8688)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003710990
serine protease MucD Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
protease Do
bjp_ig2599_scaffold_3146_9

Not on your lists

comp(8764..9432)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037C730D
Transposase {ECO:0000313|EMBL:KKT61863.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
hypothetical protein
bjp_ig2599_scaffold_3146_10
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(9494..11314)
DNA (1821bp) protein (607aa)
hypothetical protein
id=2824537 Tax=CG_Wolfe_01
id=2824537 bin=GWC1_OD1_38_17 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
bjp_ig2599_scaffold_3146_11

Not on your lists

comp(11317..11928)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVC9_9DELT id=86406 bin=ACD58 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:KKQ96964.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
hypothetical protein
bjp_ig2599_scaffold_3146_12

Not on your lists

comp(11921..12184)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FIM8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKQ96965.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
bjp_ig2599_scaffold_3146_13
unknown

Not on your lists

comp(12299..12895)
DNA (597bp) protein (199aa)

This feature has no annotations

bjp_ig2599_scaffold_3146_14
unknown

Not on your lists

comp(13320..13547)
DNA (228bp) protein (76aa)

This feature has no annotations

bjp_ig2599_scaffold_3146_15
RBG_16_OD1_47_10_curated, Parcubacteria, Bacteria

Not on your lists

comp(13584..14018)
DNA (435bp) protein (145aa)
Tax=RBG_16_OD1_47_10_curated
bjp_ig2599_scaffold_3146_16
GWA2_OD1_47_10, Parcubacteria, Bacteria

Not on your lists

comp(14062..15423)
DNA (1362bp) protein (454aa)
beta-glucosidase A (EC:3.2.1.21)
Beta-glucosidase A {ECO:0000313|EMBL:KKU51752.1}; TaxID=1618839 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10.;"
Beta-glucosidase id=2824539 bin=GWC1_OD1_38_17 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
bjp_ig2599_scaffold_3146_17
GWB1_OD1_42_17, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(15420..16880)
DNA (1461bp) protein (487aa)
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI00037BC978
UDP-N-acetylmuramoylalanine-D-glutamate ligase {ECO:0000313|EMBL:KKS44632.1}; TaxID=1618615 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWB1_42_17.;"
bjp_ig2599_scaffold_3146_18
GWA1_OD1_42_19_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(16853..17521)
DNA (669bp) protein (223aa)
trmD; tRNA (guanine-1-)-methyltransferase (EC:2.1.1.31)
tRNA (Guanine-N(1)-)-methyltransferase {ECO:0000313|EMBL:KKS45964.1}; TaxID=1618609 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWA1_42_19.;"
tRNA (guanine-N(1)-)-methyltransferase id=4790135 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
bjp_ig2599_scaffold_3146_19
Parcubacteria bacterium GW2011_GWE2_40_8, Parcubacteria, Bacteria

Not on your lists

comp(17566..17871)
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR77096.1}; TaxID=1618951 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_40_8.;"
hypothetical protein; K06960 id=5803365 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
bjp_ig2599_scaffold_3146_20
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists


comp(17965..18327)
DNA (363bp) protein (121aa)
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=5803385 bin=OD1_GWC2_34_28 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsP; 30S ribosomal protein S16
bjp_ig2599_scaffold_3146_21
unknown

Not on your lists

comp(18400..18519)
DNA (120bp) protein (40aa)

This feature has no annotations

bjp_ig2599_scaffold_3146_22

Not on your lists

comp(18894..19313)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035FE143
Nitrogen-fixing NifU domain protein {ECO:0000313|EMBL:KKR10313.1}; TaxID=1618813 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_39_18.;"
nitrogen-fixing NifU domain-containing protein
bjp_ig2599_scaffold_3146_23
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(19301..20512)
DNA (1212bp) protein (404aa)
Cysteine desulfurase {ECO:0000313|EMBL:KKT20174.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
Cysteine desulfurase id=1921048 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria) rbh
cysteine desulfurase NifS
bjp_ig2599_scaffold_3146_trna_1
unknown

Not on your lists

comp(20532..20603)
DNA (72bp)
transferRNA
bjp_ig2599_scaffold_3146_24
unknown

Not on your lists

comp(20606..21028)
DNA (423bp) protein (141aa)

This feature has no annotations

bjp_ig2599_scaffold_3146_25

Not on your lists

comp(21012..21470)
DNA (459bp) protein (153aa)
Elongation factor Ts {ECO:0000313|EMBL:KKR60036.1}; TaxID=1618924 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_40_31.;"
Elongation factor Ts id=2074380 bin=GWE2_CPR3_35_7 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
translation elongation factor Ts
bjp_ig2599_scaffold_3146_26
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists


comp(21467..22117)
DNA (651bp) protein (217aa)
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 id=5803360 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S2P
bjp_ig2599_scaffold_3146_27
unknown

Not on your lists

comp(22241..22666)
DNA (426bp) protein (142aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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