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bjp_ig2599_scaffold_23991

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_23991_1
Parcubacteria bacterium GW2011_GWB2_40_8, Parcubacteria, Bacteria

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1..1245
DNA (1245bp) protein (415aa)
NusA antitermination factor {ECO:0000313|EMBL:KKR75343.1}; TaxID=1618890 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB2_40_8.;"
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A id=5803127 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
NusA antitermination factor
bjp_ig2599_scaffold_23991_2
unknown

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1366..1881
DNA (516bp) protein (172aa)

This feature has no annotations

bjp_ig2599_scaffold_23991_3
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

1983..3377
DNA (1395bp) protein (465aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] id=15189000 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
bjp_ig2599_scaffold_23991_4
R_OD1_Giovannonibacteria_44_11, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

3374..3847
DNA (474bp) protein (158aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RIFCSPHIGHO2_02_FULL_OD1_Giovannonibacteria_44_11_cu
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] id=12497168 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hppA; membrane-bound proton-translocating pyrophosphatase
bjp_ig2599_scaffold_23991_5
R_OD1_42_9, Parcubacteria, Bacteria

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comp(3991..4524)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003615D0F
PaaX family transcriptional regulator; K02616 phenylacetic acid degradation operon negative regulatory protein Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway-like protein (paaX)
bjp_ig2599_scaffold_23991_6
GWB1_OD1_43_8, Parcubacteria, Bacteria

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comp(4691..5665)
DNA (975bp) protein (325aa)
transmembrane_regions id=5227399 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tax=GWB1_OD1_43_8
bjp_ig2599_scaffold_23991_7
R_RIF_OD1_09_41_20, RIF-OD1-9, Parcubacteria, Bacteria

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comp(5773..6555)
DNA (783bp) protein (261aa)
seg Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_41_20_curated
bjp_ig2599_scaffold_23991_8
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

comp(6552..6935)
DNA (384bp) protein (128aa)
seg Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
transmembrane_regions id=5227397 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
bjp_ig2599_scaffold_23991_9
CG_CP01_01, CG_CP01, Bacteria

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comp(7281..8036)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003614FFF
hypothetical protein Tax=CG_CP01_01
hypothetical protein
bjp_ig2599_scaffold_23991_10

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comp(8026..8409)
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR60332.1}; TaxID=1618924 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_40_31.;"
bjp_ig2599_scaffold_23991_11
Parcubacteria bacterium GW2011_GWB2_40_8, Parcubacteria, Bacteria

Not on your lists

comp(8495..10243)
DNA (1749bp) protein (583aa)
Type IV secretory pathway VirB4 component-like protein {ECO:0000313|EMBL:KKR75315.1}; TaxID=1618890 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB2_40_8.;"
id=5227396 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
conjugal transfer protein TraC
bjp_ig2599_scaffold_23991_12
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10253..10756)
DNA (504bp) protein (168aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
hypothetical protein id=5803194 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
Displaying 12 items

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