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bjp_ig2599_scaffold_10100

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_10100_1
Parcubacteria bacterium GW2011_GWD2_40_9, Parcubacteria, Bacteria

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3..635
DNA (633bp) protein (211aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR82609.1}; TaxID=1618943 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_40_9.;"
hypothetical protein id=5803194 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
bjp_ig2599_scaffold_10100_2
R_OD1_41_19, Parcubacteria, Bacteria

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622..2511
DNA (1890bp) protein (630aa)
Type IV secretory pathway VirB4 components-like protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
type IV secretory pathway VirB4 components-like protein id=5803195 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
conjugal transfer protein TraC
bjp_ig2599_scaffold_10100_3

Not on your lists

2456..2896
DNA (441bp) protein (147aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR60332.1}; TaxID=1618924 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_40_31.;"
bjp_ig2599_scaffold_10100_4
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

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2935..3879
DNA (945bp) protein (315aa)
seg id=5803196 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=GWB1_OD1_41_6_partial
bjp_ig2599_scaffold_10100_5
GWB1_OD1_43_8, Parcubacteria, Bacteria

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4791..5576
DNA (786bp) protein (262aa)
transmembrane_regions id=5227399 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tax=GWB1_OD1_43_8
bjp_ig2599_scaffold_10100_6
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

5725..6258
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003615D0F
PaaX family transcriptional regulator; K02616 phenylacetic acid degradation operon negative regulatory protein Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway-like protein (paaX)
bjp_ig2599_scaffold_10100_7
R_OD1_45_15, Parcubacteria, Bacteria

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comp(6770..7186)
DNA (417bp) protein (139aa)
ppa; inorganic pyrophosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1] Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
ppa; inorganic pyrophosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1] id=5204 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
inorganic diphosphatase
bjp_ig2599_scaffold_10100_8
unknown

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comp(7293..7400)
DNA (108bp) protein (36aa)

This feature has no annotations

bjp_ig2599_scaffold_10100_9
GWF2_OD1_40_10, Parcubacteria, Bacteria

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comp(7471..8640)
DNA (1170bp) protein (390aa)
NusA antitermination factor Tax=GWF2_OD1_40_10
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A id=5803127 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
NusA antitermination factor
bjp_ig2599_scaffold_10100_10
unknown

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comp(8794..8907)
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 10 items

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