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This organism can only be binned in the context of its binning project GD2017-1_B1_S1_Biohub_coassembly. Please contact the project owner (coralline@gmail.com) to become a member and gain access.

bjp_ig2599_scaffold_8183

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Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_8183_1
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

3..2054
DNA (2052bp) protein (684aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037FE861
ATPase AAA-2 domain-containing protein; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
ATPase AAA-2 domain-containing protein
bjp_ig2599_scaffold_8183_2
unknown

Not on your lists

2112..2366
DNA (255bp) protein (85aa)

This feature has no annotations

bjp_ig2599_scaffold_8183_3
GWB1_OD1_41_12, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

2425..3432
DNA (1008bp) protein (336aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR88769.1}; TaxID=1619006 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWB1_41_12.;"
Putative DNA recombination protein id=2823881 bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
bjp_ig2599_scaffold_8183_4
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

3620..4174
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003615D0F
PaaX family transcriptional regulator; K02616 phenylacetic acid degradation operon negative regulatory protein Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway-like protein (paaX)
bjp_ig2599_scaffold_8183_5
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(4474..5085)
DNA (612bp) protein (204aa)
Recombination protein RecR Tax=GWB1_OD1_43_8
recR; recombination protein RecR; K06187 recombination protein RecR id=5803502 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
recR; recombination protein RecR
bjp_ig2599_scaffold_8183_6
Parcubacteria bacterium GW2011_GWB2_40_8, Parcubacteria, Bacteria

Not on your lists

comp(5082..5708)
DNA (627bp) protein (209aa)
DNA helicase n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000374E9DF
Replicative DNA helicase {ECO:0000313|EMBL:KKR75528.1}; TaxID=1618890 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB2_40_8.;"
replicative DNA helicase
bjp_ig2599_scaffold_8183_7
R_OD1_Campbellbacteria_35_12, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

6068..6712
DNA (645bp) protein (215aa)
Transposase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY57_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_OD1_Campbellbacteria_35_12_curated
hypothetical protein
bjp_ig2599_scaffold_8183_8
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

6800..8134
DNA (1335bp) protein (445aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] id=5803517 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
glutamyl-tRNA synthetase
bjp_ig2599_scaffold_8183_9
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

8137..9435
DNA (1299bp) protein (433aa)
peptidase M23 Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
peptidase M23b id=5803516 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
spoIIQ; cell wall-binding protein
bjp_ig2599_scaffold_8183_10
RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

9432..9608
DNA (177bp) protein (59aa)
transmembrane_regions Tax=RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated
bjp_ig2599_scaffold_8183_11
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

9653..10786
DNA (1134bp) protein (378aa)
hypothetical protein
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein id=3152209 bin=GWC1_OD1_38_17 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
bjp_ig2599_scaffold_8183_12
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(11223..12413)
DNA (1191bp) protein (397aa)
CTP synthase; K01937 CTP synthase [EC:6.3.4.2] Tax=CG_CPR04_01
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=uncultured bacterium RepID=K2F4C4_9BACT
bjp_ig2599_scaffold_8183_13
Parcubacteria bacterium GW2011_GWB2_40_8, Parcubacteria, Bacteria

Not on your lists


comp(12561..12992)
DNA (432bp) protein (144aa)
50S ribosomal protein L9 {ECO:0000313|EMBL:KKR75532.1}; TaxID=1618890 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB2_40_8.;"
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 id=5803507 bin=OD1_GWC2_34_28 species=Thermosipho africanus genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L9
bjp_ig2599_scaffold_8183_14
R_WWE3_35_17, WWE3, Bacteria

Not on your lists

13022..13417
DNA (396bp) protein (132aa)
nucleotidyltransferase; K07076 Tax=RIFCSPHIGHO2_01_FULL_WWE3_35_17_curated
nucleotidyltransferase; K07076 id=2381 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
bjp_ig2599_scaffold_8183_15
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

13414..13824
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2N936_9CLOT
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
hypothetical protein
bjp_ig2599_scaffold_8183_16
RLO_OD1_41_13, Parcubacteria, Bacteria

Not on your lists

13976..14680
DNA (705bp) protein (235aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated
Transposase id=4390398 bin=GWC2_OP3_44_8 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein
bjp_ig2599_scaffold_8183_17
unknown

Not on your lists

comp(14783..15025)
DNA (243bp) protein (81aa)

This feature has no annotations

bjp_ig2599_scaffold_8183_18
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(15114..16238)
DNA (1125bp) protein (375aa)
ctpA; carboxy-terminal-processing protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
ctpA; carboxy-terminal-processing protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=5803506 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
prc; carboxyl-terminal protease
bjp_ig2599_scaffold_8183_19

Not on your lists

16279..17193
DNA (915bp) protein (305aa)
Mg2 transporter protein CorA family protein {ECO:0000313|EMBL:KKR47630.1}; TaxID=1618815 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_143.;"
Mg2 transporter protein CorA family protein; K03284 magnesium transporter id=5803505 bin=OD1_GWC2_34_28 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Mg2+ and Co2+ transporter
bjp_ig2599_scaffold_8183_20

Not on your lists

17330..17716
DNA (387bp) protein (129aa)
Type I restriction/modification enzyme n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L6V4_RUMHA id=5348 bin=ACD12 species=Blautia hansenii genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Type I restriction/modification enzyme {ECO:0000313|EMBL:EKE15353.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
bjp_ig2599_scaffold_8183_21
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

17736..18788
DNA (1053bp) protein (351aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=CG_CPR10_03
cysS; Cysteine-tRNA ligase (EC:6.1.1.16)
hypothetical protein, partial n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035FA1DA
bjp_ig2599_scaffold_8183_22
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(18763..19890)
DNA (1128bp) protein (376aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl
murG2; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] id=5227062 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
bjp_ig2599_scaffold_8183_23
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(19912..21009)
DNA (1098bp) protein (366aa)
spoVE; stage V sporulation protein E; K03588 cell division protein FtsW Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
spoVE; stage V sporulation protein E; K03588 cell division protein FtsW id=5803520 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
stage V sporulation protein E
bjp_ig2599_scaffold_8183_24
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(20990..21367)
DNA (378bp) protein (126aa)
hypothetical protein; K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50] Tax=RBG_13_RIF_OD1_08_37_53_curated
S-adenosylmethionine decarboxylase (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LTM2_HIPMA
bjp_ig2599_scaffold_8183_25
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(21364..22965)
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FHQ6_9BACT
Amidohydrolase 3 {ECO:0000313|EMBL:KKT20349.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
amidohydrolase
bjp_ig2599_scaffold_8183_26
RLO_OD1_41_13, Parcubacteria, Bacteria

Not on your lists

23077..23781
DNA (705bp) protein (235aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated
Transposase id=5227387 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
bjp_ig2599_scaffold_8183_27
Parcubacteria bacterium GW2011_GWB2_40_8, Parcubacteria, Bacteria

Not on your lists

comp(23815..24705)
DNA (891bp) protein (297aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] id=5803555 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000313|EMBL:KKR75548.1}; TaxID=1618890 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB2_40_8.;"
hypothetical protein
bjp_ig2599_scaffold_8183_28
R_RIF_OD1_11_44_35, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(24866..25657)
DNA (792bp) protein (264aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] id=5803556 bin=OD1_GWC2_34_28 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
D-alanyl-D-alanine carboxypeptidase Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_11_44_35_curated
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
bjp_ig2599_scaffold_8183_29
GWA2_OD1_rel_E2_38_254_42_10, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

25674..26132
DNA (459bp) protein (153aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS25303.1}; TaxID=1619004 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWA2_42_10.;"
seg id=5803564 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
bjp_ig2599_scaffold_8183_30

Not on your lists

comp(26182..26730)
DNA (549bp) protein (183aa)
Hydrolase of MutT (NUDIX) family protein n=1 Tax=uncultured bacterium RepID=K1Z1V9_9BACT
NUDIX hydrolase {ECO:0000313|EMBL:KKS25889.1}; TaxID=1618819 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_11.;"
hydrolase
Displaying items 1-30 of 43 in total

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