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bjp_ig2599_scaffold_1908

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_1908_1
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(1..93)
DNA (93bp) protein (31aa)
aromatic amino acid permease Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
bjp_ig2599_scaffold_1908_2
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(117..668)
DNA (552bp) protein (184aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Putative uncharacterized protein id=4731754 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
bjp_ig2599_scaffold_1908_3
R_OD1_Giovannonibacteria_45_23, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(880..1353)
DNA (474bp) protein (158aa)
ndk; nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPHIGHO2_01_FULL_OD1_Giovannonibacteria_45_23_curated
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=uncultured bacterium RepID=K2BS43_9BACT
bjp_ig2599_scaffold_1908_4
R_RIF_OD1_11_44_35, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1375..2217)
DNA (843bp) protein (281aa)
DNA internalization-related competence protein ComEC/Rec2 Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_11_44_35_curated
DNA internalization-like competence protein ComEC/Rec2; K02238 competence protein ComEC id=5803006 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
competence protein ComEC
bjp_ig2599_scaffold_1908_5
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(2218..3546)
DNA (1329bp) protein (443aa)
DNA internalization-related competence protein ComEC/Rec2 Tax=GWB1_OD1_43_8
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC id=5803109 bin=OD1_GWC2_34_28 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ComEC/Rec2-like protein
bjp_ig2599_scaffold_1908_6
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(3561..3983)
DNA (423bp) protein (141aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
hypothetical protein id=3006 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
bjp_ig2599_scaffold_1908_7
R_Nitrospirae_40_19, Nitrospirae, Bacteria

Not on your lists

comp(3976..4386)
DNA (411bp) protein (137aa)
DNA polymerase beta domain protein region n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BJJ0_THEXL
nucleotidyltransferase Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curated
DNA polymerase beta domain-containing protein region
bjp_ig2599_scaffold_1908_8

Not on your lists

comp(4418..4861)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036CFFF5
Ribonuclease H {ECO:0000313|EMBL:KKS58003.1}; TaxID=1618823 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_35.;"
ribonuclease H
bjp_ig2599_scaffold_1908_9
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(4858..5673)
DNA (816bp) protein (272aa)
hypothetical protein Tax=CG_Wolfe_01
ROK family protein id=2824528 bin=GWC1_OD1_38_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation rbh
glucose kinase
bjp_ig2599_scaffold_1908_10
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(5627..7447)
DNA (1821bp) protein (607aa)
hypothetical protein
id=2824537 Tax=CG_Wolfe_01
id=2824537 bin=GWC1_OD1_38_17 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation rbh
bjp_ig2599_scaffold_1908_11
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(7450..8106)
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVC9_9DELT id=86406 bin=ACD58 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:KKS71724.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
hypothetical protein
bjp_ig2599_scaffold_1908_12

Not on your lists

comp(8054..8308)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FIM8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS34634.1}; TaxID=1618926 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_12.;"
bjp_ig2599_scaffold_1908_13

Not on your lists

comp(8333..9520)
DNA (1188bp) protein (396aa)
Beta-glucosidase, beta-glucosidase {ECO:0000313|EMBL:KKT91422.1}; EC=3.2.1.21 {ECO:0000313|EMBL:KKT91422.1};; TaxID=1618914 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_G
beta-glucosidase A (EC:3.2.1.21)
Beta-glucosidase id=4838949 bin=GWC2_OD1_43_27 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
bjp_ig2599_scaffold_1908_14
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(9574..11325)
DNA (1752bp) protein (584aa)
single-stranded-DNA-specific exonuclease recJ (EC:3.1.-.-); K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] id=5803114 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
Single-stranded-DNA-specific exonuclease RecJ Tax=GWB1_OD1_43_8
single-stranded-DNA-specific exonuclease RecJ
bjp_ig2599_scaffold_1908_15
R_OD1_48_14, Parcubacteria, Bacteria

Not on your lists

comp(11560..11805)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036E2F04
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_48_14_curated
hypothetical protein
bjp_ig2599_scaffold_1908_16
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

11904..12308
DNA (405bp) protein (135aa)
Histidine triad (HIT) protein {ECO:0000313|EMBL:KKT21568.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
Uncharacterized HIT-like protein MJ0866 id=2076533 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
histidine triad (HIT) protein
bjp_ig2599_scaffold_1908_17
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(12301..13374)
DNA (1074bp) protein (358aa)
Phosphoglycerate kinase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q154_9BACT rbh
Phosphoglycerate kinase {ECO:0000313|EMBL:KKT21567.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
pgk; phosphoglycerate kinase
bjp_ig2599_scaffold_1908_18

Not on your lists

comp(13688..14041)
DNA (354bp) protein (118aa)
triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] id=5803118 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Marine sediment metagenome DNA, contig: S06H3_S20704 {ECO:0000313|EMBL:GAI55200.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
tpiA; triosephosphate isomerase
bjp_ig2599_scaffold_1908_19
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

comp(14063..15436)
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036E149B
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
bjp_ig2599_scaffold_1908_20
GWA2_RIF_OD1_07_46_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(15468..16436)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036823E7
hypothetical protein Tax=GWA2_RIF_OD1_07_46_15_curated
bjp_ig2599_scaffold_1908_21
GWA2_RIF_OD1_07_46_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(16437..18191)
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035ED688
hypothetical protein Tax=GWA2_RIF_OD1_07_46_15_curated
bjp_ig2599_scaffold_1908_22
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(18191..19405)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZT7_9BACT rbh
Type II secretion system protein {ECO:0000313|EMBL:KKT18832.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
hypothetical protein
bjp_ig2599_scaffold_1908_23
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(19502..19870)
DNA (369bp) protein (123aa)
id=2899561 Tax=RBG_13_RIF_OD1_07_42_11_curated
id=2899561 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
bjp_ig2599_scaffold_1908_24
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(19867..20115)
DNA (249bp) protein (83aa)
Uncharacterized protein (Fragment) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Uncharacterized protein (Fragment) id=2899562 bin=GWA1_ZB2_49_26 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
bjp_ig2599_scaffold_1908_25
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(20115..21140)
DNA (1026bp) protein (342aa)
Uncharacterized protein (Fragment) id=2899562 bin=GWA1_ZB2_49_26 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=GWB1_OD1_43_8
bjp_ig2599_scaffold_1908_26
R_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(21654..21941)
DNA (288bp) protein (96aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_47_10b_curated
bjp_ig2599_scaffold_1908_27
R_RIF_OD1_11_46_22b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(21917..22276)
DNA (360bp) protein (120aa)
Putative uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_46_22b_curated
Putative uncharacterized protein id=2169467 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
bjp_ig2599_scaffold_1908_28
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(22307..23341)
DNA (1035bp) protein (345aa)
id=2169464 Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
id=2169464 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
bjp_ig2599_scaffold_1908_29
unknown

Not on your lists

comp(23428..23784)
DNA (357bp) protein (119aa)

This feature has no annotations

bjp_ig2599_scaffold_1908_30
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(23906..25546)
DNA (1641bp) protein (547aa)
Tfp pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
Tfp pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB id=5803124 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
secretion system protein E
Displaying items 1-30 of 34 in total

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